Gene Shew185_4182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4182 
Symbol 
ID5370963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4987472 
End bp4988053 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content48% 
IMG OID640832447 
Productcytochrome C oxidase assembly protein 
Protein accessionYP_001368361 
Protein GI153002680 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3175] Cytochrome oxidase assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACC ATCACCAGCC AGAAAAACCT AAGTCAAATC GAAAGCTTAT CAGCATGCTC 
GTCATGGGCT GTATTGGTAT GTTTGGTTTT GGGTTCGCGC TGGTGCCGCT ATACGATGTG
CTATGTGAAA AGCTGGGGAT TAACGGTAAA ACCTCCAATA CCGCCAGTAG TTATCAAGCG
ATAACCATAG ATACTAGCCG TATTGTCACA GTGGAATTTA TCTCCCAAGT GCAAACGGGT
ATGCCGTGGA AATTTGAGCC GCAAACCAAG CGGCTCGAAG TTCACCCCGG CGGACTGATA
CACACAGCAT TTTTGGCACG CAATGTGTCA GACAGAGCCA CGGTCGGTCA GGCGATACCT
TCAATATCAC CCGGCCAAGG CGCAGCATAT TTTAATAAAA CGGAATGTTT TTGCTTTAAC
CAACAGCACT TAGCGGCTTC GACAAGCGCT GAGTTGCCGC TCATTTTCTT TGTGGATCCT
CAGTTACCTG AATCCATCCA CACTCTGACC CTCTCTTACA CCCTCTACGA CATTACCGAC
AAGCAGTTAG CGTCTGCCAT AGAGCAAGGA GCTGCAAAAT GA
 
Protein sequence
MTNHHQPEKP KSNRKLISML VMGCIGMFGF GFALVPLYDV LCEKLGINGK TSNTASSYQA 
ITIDTSRIVT VEFISQVQTG MPWKFEPQTK RLEVHPGGLI HTAFLARNVS DRATVGQAIP
SISPGQGAAY FNKTECFCFN QQHLAASTSA ELPLIFFVDP QLPESIHTLT LSYTLYDITD
KQLASAIEQG AAK