Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4178 |
Symbol | |
ID | 5371292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4982780 |
End bp | 4983400 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640832443 |
Product | LexA repressor |
Protein accession | YP_001368357 |
Protein GI | 153002676 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACCTT TGACGCCACG CCAAGCTGAA ATTTTAGAGC TAATTAAACG AAATATTGCC GATACTGGCA TGCCACCCAC TCGGGCAGAA ATTGCGACCC GTTTAGGTTT TAAGAGCGCC AATGCGGCTG AAGAGCATCT TAAAGCGTTG GCGAAAAAGG GCTGCATTGA GATCATGCCA GGCACATCGC GGGGCATTCG TCTGACTGCG GAAGTCGAAG AAGTAACTGA AACAGGTTTA CCGCTTATCG GTCAAGTAGC CGCTGGCGAA CCTATTCTCG CCCAAGAACA TGTTGAACAG TACTACCAAG TCGACCCAAG CATGTTTCAT CCCGCCGCCG ATTTTTTACT GCGGGTTAAA GGCGACAGCA TGAAGAATAT CGGCATTCTC GAAGGAGATT TGCTGGCAGT TCATAAAGTA CAACAAGCTA GAAATGGTCA AGTGGTTGTC GCTAGAGTCG ACGACGATGT CACTGTTAAA CGTTTCGAAA AAAAAGGTAA TGTGGTCTAT CTACACGCCG AAAATGAAGA CTATTCCCCG ATTAAAGTGG ATTTAGGCTA TCAAAGTTTA ACAATTGAAG GACTCGCCGT CGGTGTGATC CGTAATGGAG ATTGGCTATG A
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Protein sequence | MRPLTPRQAE ILELIKRNIA DTGMPPTRAE IATRLGFKSA NAAEEHLKAL AKKGCIEIMP GTSRGIRLTA EVEEVTETGL PLIGQVAAGE PILAQEHVEQ YYQVDPSMFH PAADFLLRVK GDSMKNIGIL EGDLLAVHKV QQARNGQVVV ARVDDDVTVK RFEKKGNVVY LHAENEDYSP IKVDLGYQSL TIEGLAVGVI RNGDWL
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