| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4173 |
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| Symbol | |
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| ID | 5370718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4973409 |
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| End bp | 4976558 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640832438 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001368352 |
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| Protein GI | 153002671 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAT ATATTATCGA GGCGTCCATC AGGCAGCGAT TTATGGTGTT GATTATCGCC
ATCATGATCA CTGTTTGGGG CGTACAGGAG CTGCGAAAAA CGCCGCTCGA TGCGCTGCCG
GATTTATCCG ATGTGCAAGT GATCATTAAA ACCCCTTATC CGGGTCAAGC GCCAAAATTG
GTTGAAGAAC AAGTGACTTA TCCCTTGTCG ACCGCCATGT TAGCCGTACC TGGTGCTAAA
ACCGTGCGTG GTTATTCCAT GTTCGGCGAC TCTTACGTGT ATGTGATTTT TGAAGATGGC
ACCGACATTT ACTGGGCTCG CTCACGGGTG CTTGAATACC TGAGTCAGAT CAGCAGCCGT
TTGCCACAAA ATGTGCAACC TTCCCTCGGC CCAGATGCGT CTGGTGTCGG TTGGGTGTAT
GAATATGCGC TAGTCGATCG CTCCGGTAAT TTAGATTTAT CGCAACTCAA GAGTCTGCAG
GATTGGTATC TCAAGCTAGA GCTGCAAAGC GTGGCAGGCG TGTCTGAAGT CGCCACCGTC
GGCGGCATGG AGCAAACCTA TCAGATAGTA CTTGAACCCG ACAAAATGGC GATCTATAAG
CTCGATATCG CCACAATTAA ACAAGCCATA GACAAAGCCA ACAGCGAAGC CGGCGGCTCA
GTGATCGAGA TGGCCGAAGC TGAATACATG GTGCGCGCTA AAGGCTATCG CCAGACGCTA
GAGGATTTTC GTGAAATCCC CCTTGGTATC ACCAGTCCTT CTGGCACAGG TTTAACCCTC
AAAGATGTTG CTACTGTGCG TAAAGGCCCA GCCTCACGCC GCGGCATAGC CGAACTCGAC
GGTGAAGGTG AAGTCGTTGG CGGAATTGTG GTGATGCGTT ACGGCGAAAA CGCCTTAGCG
ACAATTGATG CGGTGAAAGC AAAACTCGAA GAACTCAAAG CCGGCCTGCC CGATGGGGTT
GAGATTATCC CAACCTATGA CAGATCCCAC TTGATCCTTA AGTCCGTCGA CAACTTGTTT
AGCAAGGTCG TCGAAGAAAT GTTGGTGGTC GGCTTAGTCT GCTTGCTGTT TTTACTACAT
GCGCGCTCCA CACTCGTGGC CGTGATCACC TTGCCGCTAT CCATCCTTAT CGCCTTTATC
GTGATGAACA AGATGGGTGT TAACGCCAAT ATCATGAGCC TTGGCGGCAT CGCCATTGCC
ATCGGCGCCG TGGTGGATGG CGCGATTGTG ATGATCGAAA ACTTGCACAA GCATTTAGAG
CATTTTAAAG CGGATCATGA TCGCGAACCC GATACGAAAG AGCATTGGCG CATCGTCACC
GAAGCGTCGA TTGAAGTCGG CCCTGCGTTA TTTTTCTCAT TGATTATTAT TACCTTAAGC
TTTGTGCCTG TGTTCGCACT CGAGGCGCAG GAAGGTCGAT TATTCGCGCC ACTGGCCTAC
ACTAAAACCT TCGCCATGGC AGCGGCGGCC TTTTTATCCA TTACCTTAGT GCCGATTTTG
ATGGGTTACT TTATTCGCGG CAAAATCCCC AGCGAACGCA GCAATCCCAT CAGCCGTTTC
TTGATCGCGA TTTATCAACC TTCACTAAAA CTGGTGCTGA AATTCCCTAA AGTCACCCTG
ATGTTAGCGT TAATCGCGCT GGCCAGCGCT TGGTATCCTA TGACCCGCAT GGGCAGCGAG
TTTATGCCCG CACTCGAAGA AGGCGATTTG CTCTACATGC CAACGGCATT GCCAGGCATC
AGTGCCAGCA AGGCCGCCGA AGTGCTGCAG CAAACCGACC GTTTAATTAA AACCGTGCCC
GAAGTGGCCC GGGTGTTTGG CAAAGTAGGA CGCGCCGAAA CCGCGACCGA TCCCGCGCCG
CTGACCATGC TTGAAACCAC TATCATGCTT AAACCCCATG ACGAATGGCG TGAAGGCATG
ACCTTAGATG GCATTATTGC CCAGCTACAG CAAACCGTAA AAGTACCGGG ACTCACCAAT
GCTTGGGTGC AACCCATCAA AACCCGTATC GACATGCTCT CGACGGGGAT CAAAACCCCT
GTCGGCATTA AGATCACCGG TGCCGATGTC AACGAGTTGC AAAGCATTGG CACTAAGATT
GAAGCTATCT TAAGCAAAGT GCCGCACACC AAATCGGCCT ACGCCGAACG CAGTGGCGGC
GGCCGTTATA TCGATATCAG TCCGAAACTG GATGTGGCCG CACGTTACGG TATGACGTTG
CAGGATATTC AAGATGTGGT GCGTTATGCC ATTGGCGGTA TGGATATTGG TGAGTCGGTA
CAAGGCGCCG AACGTTATCC AATCAACCTA CGTTATCCCC GTGAACTGCG CGACAACATT
GAGAAACTGC GCGAGCTACC CGTGATCACT AAGTCGGGGC ATTATCTGCC GCTACGTAAC
TTGGCCGACA TCGAAATTAA CGATGGCGCG CCTATGTTAA AGAGTGAGAA TGGCCGCTTA
ATCTCTTGGG TGTTTATCGA TATCGAGGGC ACCTCTATCG GTGAGTATAT CGCCACTGCG
AAAACTGCCT TAGACGCCGA ACTCGTCGTC CCGCCCCGTT ACAGCTATAG CTTTGCGGGT
CAGTACGAAT ATATGCAAAG GGTCGATGCT AAGCTTAAAC AAGTGATCCC TATGGCGTTA
GCCGTCATCT TCATCTTGCT GATGATGACC TTCGGCTCCA CCATTCAGGC CAGCATTATT
ATGCTCAGTT TACCTTTCGC GTTGGTCGGC AGTACTTGGT TGTTATATCT ACTGGATTAC
AACATCTCAG TGGCCGTTGC TGTCGGTATG ATTGCCTTAG CGGGTGTCGC AGCCGAGTTT
GGGGTGGTGA TGTTGGTGTA TCTCAATAAC GCCATCAAAC ACAGGCAAGA AAAAGATAAT
TACCACAGCG TCAATGACTT GAAAGAAGCC TTGATAGAAG GTGCTGTGAT GCGTATCCGC
CCCAAAGCGA TGACAGTGGC AACCATCTTC TTCGGCCTAC TGCCCATTAT GTGGGGCGCA
GGTTCGGGTA ACGATGTAAT GCAAAAAATC GCCGCACCTA TGGTAGGCGG CATGGTCACA
GCGCCCATAC TGTCGCTATT TGTCCTACCC GCACTCTATC TACTGATTTA CTCGCGTAAA
TTAAAGAAAG ATGCTGCGCA CGTAAGTTAA
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| Protein sequence | MLKYIIEASI RQRFMVLIIA IMITVWGVQE LRKTPLDALP DLSDVQVIIK TPYPGQAPKL
VEEQVTYPLS TAMLAVPGAK TVRGYSMFGD SYVYVIFEDG TDIYWARSRV LEYLSQISSR
LPQNVQPSLG PDASGVGWVY EYALVDRSGN LDLSQLKSLQ DWYLKLELQS VAGVSEVATV
GGMEQTYQIV LEPDKMAIYK LDIATIKQAI DKANSEAGGS VIEMAEAEYM VRAKGYRQTL
EDFREIPLGI TSPSGTGLTL KDVATVRKGP ASRRGIAELD GEGEVVGGIV VMRYGENALA
TIDAVKAKLE ELKAGLPDGV EIIPTYDRSH LILKSVDNLF SKVVEEMLVV GLVCLLFLLH
ARSTLVAVIT LPLSILIAFI VMNKMGVNAN IMSLGGIAIA IGAVVDGAIV MIENLHKHLE
HFKADHDREP DTKEHWRIVT EASIEVGPAL FFSLIIITLS FVPVFALEAQ EGRLFAPLAY
TKTFAMAAAA FLSITLVPIL MGYFIRGKIP SERSNPISRF LIAIYQPSLK LVLKFPKVTL
MLALIALASA WYPMTRMGSE FMPALEEGDL LYMPTALPGI SASKAAEVLQ QTDRLIKTVP
EVARVFGKVG RAETATDPAP LTMLETTIML KPHDEWREGM TLDGIIAQLQ QTVKVPGLTN
AWVQPIKTRI DMLSTGIKTP VGIKITGADV NELQSIGTKI EAILSKVPHT KSAYAERSGG
GRYIDISPKL DVAARYGMTL QDIQDVVRYA IGGMDIGESV QGAERYPINL RYPRELRDNI
EKLRELPVIT KSGHYLPLRN LADIEINDGA PMLKSENGRL ISWVFIDIEG TSIGEYIATA
KTALDAELVV PPRYSYSFAG QYEYMQRVDA KLKQVIPMAL AVIFILLMMT FGSTIQASII
MLSLPFALVG STWLLYLLDY NISVAVAVGM IALAGVAAEF GVVMLVYLNN AIKHRQEKDN
YHSVNDLKEA LIEGAVMRIR PKAMTVATIF FGLLPIMWGA GSGNDVMQKI AAPMVGGMVT
APILSLFVLP ALYLLIYSRK LKKDAAHVS
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