| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4172 |
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| Symbol | |
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| ID | 5370717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4971858 |
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| End bp | 4973399 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640832437 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001368351 |
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| Protein GI | 153002670 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAT TTAATACAGT AAAAAAGCAG GCCCCTAAGG CCGTACTGAT CTTGAGTAGC
TTACTCATCA GTACGCCTTG GTTGAGCCAT GCCCAGCTGG CTAACACACA AGAGCCCACG
GCGACCGAAG CGGCAGTAAA TTCTGCAACT GCGCCAAAGA ATAATCCGTT AAATCAAGTG
AAAACCTACA CTTGTCCTAT GCATCCCGAA GTGATCAGCC ATGAGCCGGG TCGCTGCCCT
AAGTGCAATA TGTTTTTAGT TGAGAAACTC GATGCCGCGA ATCCTGCGGC CGAGCATGCA
CAGCATCAAG CCGCAGATCA CCAAGCCTCT GAGCATGGGC AAACCTCTGC CGCCAAAGCT
TCGAGTCAGG TATTCGATAC CCCAACCCCT AAGGCCGACA GTTTAGTTAA AGCCCAAAAT
CATGTGACAA CAATCAAGTA CGTTTGCCCT ATGCATGCCC ACATTATCAG TGACGTACCC
GGCACTTGCC CTATCTGCGG TATGAACTTA GAAAAGGTCG AAACGGGCGG TAATACCCAA
GAAATCAACA TCAATGTATC CGGCAGCATG CAGCAAGCGT TGGCACTCAA AGTCGCCAAG
GTTGAACGCG ACACACTGTG GAAATTTGTC GAAACCGTCG GTCAAATCGA CTATGACGAA
AGCCAAATCA CCCATATCCA TGCCCGCGTT ACTGGCTGGA TTGAAAAACT GATGATCAAA
TCCGTGGGTG ATACCGTTAA GAAAGATCAA CTGATCTACG AGATCTATTC CCCCGATTTA
ATCAACGCCC AAGATGACTA CCTGCTCGCG ATGGACACCG CTAAAGCAAA CGGCCAAGGC
CGCTACAAAG ATTTGGTGCG CAATGCGGGC TTACGCTTAT CCTTCCTTGG TTTTAACGAC
AGGCAAATCA AGCAATTAGC CGAGTCACAT CAAACCCAAT ATCGGGTACC TTTCTACGCC
AAAGAAGACG GCATAGTGAA GGCTCTCGAC ATTCGCGATG GCATGTATAT TCAGCCGTCG
ACGGAAGTCA TGTCTGTGGT GGATCTATCT AAAGTTTGGG TGATTGCCGA CGTATTCGAG
AACGAGCAAA GCTGGATTGC CAAAGGTCAG AAGGCCGAAA TTGCCGTTCC CGCCATGAAT
ATCAGCGGCA TCGAAGGCAC GATCGATTAC ATCTATCCTG AGCTTGATCC TGTCACTCGC
AGCCTGCGAG TACGAGTAGT GCTCAACAAT ACCGAGATAG ATTTAAGACC TAAAACCCTC
GCCAAAGTCT CACTATTCGG TGGCCCGAAT AAAGATGTGC TAGTGATCCC GCAGGAAGCT
TTAATTCAAA CGGGTAAAGA AAACCGCGTG ATCGTCAAGC AAACCGACGA CAGCTTTACC
GCCAAGGCCG TAACTGTCGG CATGATGAGC CAAGGCAAGG CCGAGATTAT TTCAGGCCTG
ACTGAAGGTG AACGTGTGGT GATTTCGGGG CAATTCTTAC TCGACTCCGA GGCTAGCCTC
AAGGGCAGTT TAATGCGTTT AAGCAGCGGT CATCAGCACT AG
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| Protein sequence | MNQFNTVKKQ APKAVLILSS LLISTPWLSH AQLANTQEPT ATEAAVNSAT APKNNPLNQV
KTYTCPMHPE VISHEPGRCP KCNMFLVEKL DAANPAAEHA QHQAADHQAS EHGQTSAAKA
SSQVFDTPTP KADSLVKAQN HVTTIKYVCP MHAHIISDVP GTCPICGMNL EKVETGGNTQ
EININVSGSM QQALALKVAK VERDTLWKFV ETVGQIDYDE SQITHIHARV TGWIEKLMIK
SVGDTVKKDQ LIYEIYSPDL INAQDDYLLA MDTAKANGQG RYKDLVRNAG LRLSFLGFND
RQIKQLAESH QTQYRVPFYA KEDGIVKALD IRDGMYIQPS TEVMSVVDLS KVWVIADVFE
NEQSWIAKGQ KAEIAVPAMN ISGIEGTIDY IYPELDPVTR SLRVRVVLNN TEIDLRPKTL
AKVSLFGGPN KDVLVIPQEA LIQTGKENRV IVKQTDDSFT AKAVTVGMMS QGKAEIISGL
TEGERVVISG QFLLDSEASL KGSLMRLSSG HQH
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