Gene Shew185_4167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4167 
Symbol 
ID5372661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4968845 
End bp4969408 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content44% 
IMG OID640832432 
ProductNapC/NirT cytochrome c domain-containing protein 
Protein accessionYP_001368346 
Protein GI153002665 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTGGC GTGCACTATT TAAACCTAGC GCAAAATATT CAATCCTGGC GCTACTGGTC 
GTCGGTATTG TTATCGGTGT TGTGGGCTAT TTCGCAACCC AAACAACCTT ACATGCAACC
AGCCAAGACG CATTCTGTAT GAGCTGCCAC AGCCAGCATT CATTGAAAGA TGAAGTGATG
GCATCTGCCC ACGGTAACAA CCGTGTGGGT ATCGTGGTGC AGTGTCAGCA ATGTCACATC
GCACAGGAAC CATTCCAATA CCTGAAGAAA AAGATCATCG TTTCTAAGGA CGTTATTGGT
TTCTTAACTA TCGATGGCTT TAACACGCAA GCATGGTTAG ATGAAAACCG TAAAGAACAA
GCTGAGTTAG CGCGTGATTA CCTACGTGCA ATCGATTCTT CAACCTGTCA AAACTGTCAC
AACCGTATTT ATGAAAACCA ATCAGAAAAT ATGAGCAAAA TGGCAGTGAG AATGCACAGC
AATAACTTCA AGAAAGCCCC AGAAGACAGA AAAACCTGTA TCGACTGTCA CAAAGGCGTC
GCTCACCCTT ACCCTAAAGG ATAA
 
Protein sequence
MNWRALFKPS AKYSILALLV VGIVIGVVGY FATQTTLHAT SQDAFCMSCH SQHSLKDEVM 
ASAHGNNRVG IVVQCQQCHI AQEPFQYLKK KIIVSKDVIG FLTIDGFNTQ AWLDENRKEQ
AELARDYLRA IDSSTCQNCH NRIYENQSEN MSKMAVRMHS NNFKKAPEDR KTCIDCHKGV
AHPYPKG