Gene Shew185_4165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4165 
Symbol 
ID5370647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp4967815 
End bp4968483 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content49% 
IMG OID640832430 
Productputative methyltransferase 
Protein accessionYP_001368344 
Protein GI153002663 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.484142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTAAGA ATCGAACGGT CAAAAATAAT GTGACCAAAA GTCCAACAGC CAAAAATAAA 
CCCGGTAGCG GTCAAGTGCG GATCATCGCG GGCCAATGGC GTTCGCGTCG TTTACCTATT 
CAAGATCTCG AAGGTTTACG CCCGACAACA GACAGAGTGC GCGAAACCCT GTTTAACTGG 
CTTGCCAATG ACTTAGTTAA TGCGCGAGTG CTCGACTGTT TCGGCGGCAG CGGCGCTTTA 
GCCCTCGAAG CCCTATCTCG CTATGCCAGT TTTGCTCAGA TTATCGAGTT GCAACGCGGC 
GCAGCCATGC AATTAAAAGA AAATCTGCAA ACCCTTAAAT GCGACAAGGC CGAAGTGCTC 
AACGCCGATA CCTTAGTGGT GTTGCAAAGG GGCTGCGAGC AAGGTTTCGA TGTAGTGTTT 
ATCGATCCGC CCTTTCGCAA AGGATTGGCA GAAAAGACCA TTCAATTGCT CGATACTCAA 
GCTTGGCTCA ATGATGGCGC GCTGATTTAT GTCGAGATCG AATCTGAATT AACCCAACTG 
GCCATTCCAC CTTGCTGGCA CGCCTTGAAA GAAAAGAATG CGGGGCAAGT GAGCTACCGC 
TTATATCAAT ATCAAGCCGA GAACACTGCC GAGCCTATCG AAGATGAAAG CCATGCCCTT 
GCTGATTAA
 
Protein sequence
MVKNRTVKNN VTKSPTAKNK PGSGQVRIIA GQWRSRRLPI QDLEGLRPTT DRVRETLFNW 
LANDLVNARV LDCFGGSGAL ALEALSRYAS FAQIIELQRG AAMQLKENLQ TLKCDKAEVL 
NADTLVVLQR GCEQGFDVVF IDPPFRKGLA EKTIQLLDTQ AWLNDGALIY VEIESELTQL 
AIPPCWHALK EKNAGQVSYR LYQYQAENTA EPIEDESHAL AD