| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4164 |
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| Symbol | |
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| ID | 5370646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4965766 |
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| End bp | 4967601 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832429 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_001368343 |
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| Protein GI | 153002662 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00648424 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA AAGGTTTTTT CTCCTGGTTT CGTAAAGATA AGTCACAAGA TGAGGTCGTC
GCTGAAACTC CAGTTGTTAC TCCAACACAA GACACTGAAG CAGCAGAGCG TTTAGAACAG
GAACGCGCAG AGGCGCAACG TTTAGCTGCT GAGGCAGAGG CTCAAGCAGC CGCAGAACAG
TTAGCTGCCG AGCAGGCGCA AGCCGAGCGT ATTGTCCAAG AACAAGCCGC AATCGAAGCC
CAGCGTTTAG CAGAGCAACA AGCCGAAGCG GCGCGTCTGG CGGCTGCTCA GTTAGAAGCG
GAACAACTTG CGAAAGTGCA AGCCGAGCGT ATTGCTCAAG AACAAGCACA AATCGAAGCT
CAACGTTTAG CAGAACAACA AGCCGAAGCG GCACGACTGG CGGCAGCGCA GCTAGAAGCT
GAACAACTTG CTGCAAATAA CTTAGCCGCT GAAAAAGCCG CTGCAGAGCA ATTAGCCCAA
ACGCAAGCTA AGGCTGAAGC CGAGCGTATT GCCCACGAAC AAGCACAAAT TGAAGCTCAA
CGTTTAGCAG AACAGCAAGC CGAAGCGGCA CGACTGGCGG CAGCTCAGTT AGAAGCTGAA
CAACTTGCAG CAGATAAGTT AGCCGCTGAA CAAGCCGCTG CAGAGCAATT AGCCCAAGCG
CAAGCCAAGG CTGAAGCCGA GCGAATTGCT CAAGAGCAAG CACAAATCGA AGCTCAACGT
TTAGCCGAGC AACAAGCCGA AGCGGCACGA CTGGCGGCAG CTCAGTTAGA AGCTGAACGT
GCTCGTGTTG CCGCCGAACA AGCTGCCGCT GAAGCGTTAG CTGCGGAGCA ACTCGCTGCC
GAAGCTCTGC AATCAGCTGG GCCCGTTACT GAATTGCAGC CAGAGCCGCA GGCGAGACCC
GTTAAAGAAG GGCTATTTGC TCGTCTGAAG CGTGGCTTGA TGCGTACCAG CGAGAATATT
GGCAGTGGTT TTATCGGTCT ATTTCGCGGC AAGAAAATCG ATGATGATCT GTTTGAAGAA
CTCGAAGAAC AGTTATTAAT CGCCGATGTT GGCGTCGAAA CAACCACGCG TTTGATCAAG
AATTTGACCG AGCAAGCGTC GCGTAAGCAA TTGAAAGATG CTGAAGCTTT ATATGACTTG
CTGCGGGAAG AAATGCAGAA GACGCTCGAC CCAGTCGCAA TTCCGTTAGT GCCAGACAAT
GCAAATGGCC CATTTGTGAT CTTAATGGTC GGCGTTAATG GTGTGGGTAA AACCACTACT
ATCGGCAAAT TAGCCAAACA ATATCAGAGC CAAGGTAAGT CAGTTATGTT AGCAGCGGGC
GATACCTTCC GTGCAGCTGC GGTAGAACAG TTACAGGTTT GGGGTCAACG TAATGATATT
ACTGTGATTG CCCAACATAC GGGTGCCGAT AGTGCCTCTG TACTGTTCGA TGCTTTGCAA
GCGGCTAAAG CCCGTAAAGT GGATGTGTTG ATCGCTGACA CTGCGGGTCG TCTGCAAAAC
AAAGCGCACT TGATGGAAGA ATTGAAGAAA GTGGTGCGAG TGATGAAAAA GCTCGACCCT
GATACGCCAC ATGAGGTCAT GCTGACACTA GATGCGAGCA CGGGACAAAA TGCGATTAGC
CAAGCGCAAT TATTCCAAGA AGCCGTAGGT GTAACGGGTA TTACCATCAG CAAGTTAGAC
GGAACGGCTA AGGGCGGCGT GGTCTTTGCG ATTGCCGACA AGTTTAATAT TCCGATCCGT
TACATAGGCG TGGGTGAGCA AATTGATGAT TTGCGTACTT TTAATTCGAA AGAATTTATC
GATGCCTTGT TCACTCAAGA AAAAGCGGAT AGCTAA
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| Protein sequence | MAKKGFFSWF RKDKSQDEVV AETPVVTPTQ DTEAAERLEQ ERAEAQRLAA EAEAQAAAEQ
LAAEQAQAER IVQEQAAIEA QRLAEQQAEA ARLAAAQLEA EQLAKVQAER IAQEQAQIEA
QRLAEQQAEA ARLAAAQLEA EQLAANNLAA EKAAAEQLAQ TQAKAEAERI AHEQAQIEAQ
RLAEQQAEAA RLAAAQLEAE QLAADKLAAE QAAAEQLAQA QAKAEAERIA QEQAQIEAQR
LAEQQAEAAR LAAAQLEAER ARVAAEQAAA EALAAEQLAA EALQSAGPVT ELQPEPQARP
VKEGLFARLK RGLMRTSENI GSGFIGLFRG KKIDDDLFEE LEEQLLIADV GVETTTRLIK
NLTEQASRKQ LKDAEALYDL LREEMQKTLD PVAIPLVPDN ANGPFVILMV GVNGVGKTTT
IGKLAKQYQS QGKSVMLAAG DTFRAAAVEQ LQVWGQRNDI TVIAQHTGAD SASVLFDALQ
AAKARKVDVL IADTAGRLQN KAHLMEELKK VVRVMKKLDP DTPHEVMLTL DASTGQNAIS
QAQLFQEAVG VTGITISKLD GTAKGGVVFA IADKFNIPIR YIGVGEQIDD LRTFNSKEFI
DALFTQEKAD S
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