| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4161 |
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| Symbol | |
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| ID | 5373438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4963005 |
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| End bp | 4963862 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640832426 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001368340 |
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| Protein GI | 153002659 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000335306 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTC AAACGCAATC AATGGCACTG ACAGTCCCAC AGGGCGCCAG TAGTCTAGAA
GCTTATATCC ATTCAGTGAC TAGCATCAGC ATGCTGGACG CTGAGGCTGA GTATGAGTTG
GCCAAGCGTT TACAGGAAAC GGGTGATCTA CAAGCTGCGA AGCAACTGAT TATGTCGCAC
TTACGTTTTG TAGTGCACGT TGCAAAGGGC TATTCAGGCT ATGGTTTGCC ACAGGCAGAC
CTGATCCAAG AAGGCAACAT AGGCTTGATG AAAGCGGTTA AACGCTTCGA TCCCGATGTT
GGCGTGCGTC TAGTGTCTTT TGCTGTGCAC TGGATCAAAG CTGAAATTCA TGAATATGTG
CTGAAAAACT GGCGCATTGT TAAAGTCGCG ACCACTAAAG CGCAACGTAA GTTGTTCTTT
AACATCCGTA AAGCGAAAAA ACGCTTAGGT TGGTTCAGCG ATGCAGAAGT CACTATGGTG
GCTGAAAATT TAGGTGTGTC TAAGGCCGAT GTGACCGAAA TGGAATCACG TATGGCTGCG
CAAGATCCGG CATTTGATTT AACCAATGAT CAAGACGAGG AGCATGATTT TGCCCCAGTC
CATTATTTGG AAGATCATTC ATCGGATTTA GCAGAAAACA TTGAAAACGA CAACTGGGAA
TCGAATGCCC AAGGTCGTTT ATTATCGGCC ATCAAAACCT TAGACGAACG CAGCCAGCAT
ATTCTGCGCG CCCGTTGGTT AGATGACGAT AAAACCACAC TGCAAGAACT TGCAGAGACT
TATCAAGTGT CGGCTGAACG TATTCGCCAA CTTGAGAAAA ATGCCATGAA CAAGCTGAAA
GCTTGCATGG AAGCCTAA
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| Protein sequence | MTFQTQSMAL TVPQGASSLE AYIHSVTSIS MLDAEAEYEL AKRLQETGDL QAAKQLIMSH
LRFVVHVAKG YSGYGLPQAD LIQEGNIGLM KAVKRFDPDV GVRLVSFAVH WIKAEIHEYV
LKNWRIVKVA TTKAQRKLFF NIRKAKKRLG WFSDAEVTMV AENLGVSKAD VTEMESRMAA
QDPAFDLTND QDEEHDFAPV HYLEDHSSDL AENIENDNWE SNAQGRLLSA IKTLDERSQH
ILRARWLDDD KTTLQELAET YQVSAERIRQ LEKNAMNKLK ACMEA
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