Gene Shew185_4159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4159 
Symbol 
ID5372016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp4960390 
End bp4961490 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content49% 
IMG OID640832424 
ProductO-succinylbenzoate synthase 
Protein accessionYP_001368338 
Protein GI153002657 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1441] O-succinylbenzoate synthase 
TIGRFAM ID[TIGR01927] o-succinylbenzoic acid (OSB) synthetase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTTAA CTTCGCTTAA CCTGTATCAA TATCGACTAC CGCTCGATGT ATTATTGCCC 
GTAGGCAAGC AACGCATCGA CCACAGGGCT GGATTAGTAT TGCAAGCCTG CGCCAGCGCT 
AATGTTGGTG GCGAATACAG ACAAGTCGAA GTTGAAATCG CCCCACTATC TGGCATAGAT 
GTCGATGAAC AAGTCTTAGT GGGATTTAGC CGCGAAACAC TGGCTCAAGT GCAAACGGCG 
TTAACTGAGT TATTACCCCA ACTCGGCGGT CAGCATATCG ATACCCTGCT GGATTACGCC 
GAGCAAAGTA CTTACCCTTC CTTGGCCTTT GGTTTAAGTC TGTTGCATGC CAAGTTAATG 
GGTAAGCTCG ACGCTATCCG CCCACAAACT GCCACAGTCC CTTTGATTTA TCATCCAACG 
GATGCGGGCA AGGACTTGCT CGATAACAAG ATTGCGGCGC TCGGCATGCA TGTTCATTCG 
GTGAAAGTTA AAGTCGCGCA GACCTCAATC GAAGACGAAC TGAGCCTGAT TTATGGCATT 
TTACGCACCC GCCCCCATCT CAAGCTACGT TTAGACGCAA ACCGAGGGTT TACACTGGAA 
CAAGCCATCG AATTTGCCGC TTGTTTGCCC CTAGACACCA TCGAATACAT AGAGGAACCT 
TGCCAGAATC CACAGGATAA TCTGGAATTT TATCAAGCGA TTGGTATGCC CTACGCCCTC 
GATGAATCAC TTAACGATCC CGATTATCAG TTTGCGATGC AAAATGGCCT GACTGCGCTC 
GTCATCAAAC CTATGCTGCT CGGCAGTATT GAAAAGCTAG CTAATTTAAT CGATACGGCG 
CAAAGCTATG GCGTGCGTTG CATTATCAGT TCGAGTCTTG AAAGCAGTTT AGGCATTAGC 
GATCTGGCCC ATTTAGCCGC GATTCTCACG CCCGATGAAA TCCCAGGACT CGATACCCTC 
AGCGCCTTTA GCCAAGATTT AGTCGTGTCA TCGGGTAAAA AACACTGCCT TACTCTGGCG 
CAACTTGAGC CTATTGCACA ACACGCCATT GATTCAACGC CGCAAAGTGA TGTTGGTGTA 
GCCAAGCGTG AGGAAAACTA G
 
Protein sequence
MILTSLNLYQ YRLPLDVLLP VGKQRIDHRA GLVLQACASA NVGGEYRQVE VEIAPLSGID 
VDEQVLVGFS RETLAQVQTA LTELLPQLGG QHIDTLLDYA EQSTYPSLAF GLSLLHAKLM 
GKLDAIRPQT ATVPLIYHPT DAGKDLLDNK IAALGMHVHS VKVKVAQTSI EDELSLIYGI 
LRTRPHLKLR LDANRGFTLE QAIEFAACLP LDTIEYIEEP CQNPQDNLEF YQAIGMPYAL 
DESLNDPDYQ FAMQNGLTAL VIKPMLLGSI EKLANLIDTA QSYGVRCIIS SSLESSLGIS 
DLAHLAAILT PDEIPGLDTL SAFSQDLVVS SGKKHCLTLA QLEPIAQHAI DSTPQSDVGV 
AKREEN