Gene Shew185_4158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4158 
Symbol 
ID5369618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4959568 
End bp4960362 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content51% 
IMG OID640832423 
Productalpha/beta hydrolase fold 
Protein accessionYP_001368337 
Protein GI153002656 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAACA TGGCCCGTTA CGGCGATCCT TCACTACCGA CCTTAGTGCT ACTGCATGGC 
TTTTTGGGTA CTAAGGCGGA CTGGTTGCCG TTAATGCCTG CGCTAAGCCA GCACTTCCAT
TGTATTTGTT TGGATCTGCC TGGCCATGGA GATAATCAAG CTGAAGGGCC GACTGAGGCT
AAGCTCGATT TCGACTTTTG CGTCGAAAAC ATAATGACGC GGCTCGATAG CCTTAATCCA
AGTCCCGAAC CGTTTCATCT CTACGGTTAT TCCTTAGGCG GGCGTATTGC CTTGCACCTT
GCAAAAGCCT ATCCGCAGCG CTTGTTAAGT CTGAACCTCG AATCCTGCCA CCCAGGGCTG
GTAGACCCGC AAGAAAAAAC GGCCAGAACC AAGAATGATG CCCAGTGGGC CGAGCGTTTA
TTGCATCTGG CTAGCAAAGA TTTTTTAAAC TTGTGGTATC AGCAGCCCGT GTTTGCCGAC
ATGACTGCGG CCAAACGTAA AGCCTTAATC GAGCAGAGAT CTGCCGTCTT AGATCAGCAT
CCCAAACAGC TGCTTAAAGA GGTATTCTTA GCCACTTCAC TTGCACGCCA AGCATCGATG
TGGGATGTGC CTTCACAACT TGCCTGTGAA TGCCATTTCT TTGCGGGTAG CCAAGATGCC
AAGTTTCACG CCCTCGCCCA AGAGTGGCAA TTACACGCGC CTATTCTCGT CCACAGTATT
AGCGGCGCCG GACACAACAT ACACCAAGCA GCTCCCGAGG CATTAATCGC AACAATAGTT
AAGCTGCTTG GGTAA
 
Protein sequence
MPNMARYGDP SLPTLVLLHG FLGTKADWLP LMPALSQHFH CICLDLPGHG DNQAEGPTEA 
KLDFDFCVEN IMTRLDSLNP SPEPFHLYGY SLGGRIALHL AKAYPQRLLS LNLESCHPGL
VDPQEKTART KNDAQWAERL LHLASKDFLN LWYQQPVFAD MTAAKRKALI EQRSAVLDQH
PKQLLKEVFL ATSLARQASM WDVPSQLACE CHFFAGSQDA KFHALAQEWQ LHAPILVHSI
SGAGHNIHQA APEALIATIV KLLG