Gene Shew185_4149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4149 
Symbol 
ID5371157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4950184 
End bp4951446 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content50% 
IMG OID640832415 
Productinner membrane protein YjeH 
Protein accessionYP_001368329 
Protein GI153002648 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCAA ATAGCGGAAC TATAGGTCGT TGGCAAGGTG CGGGTCTGAT GGCGACCACT 
TTGCTTGGTA CTGGGGTGTT TATTTTGCCT CAGATGACAA TTGAAAAAGC GCAATCTGGC
GCGCTAGTCG CATGGATATT GCTCACCTTA GCCATTATTC CTGTGGCGCT GGTCTTTGGT
CGTTTAGCGA GTGTATTTCC CCATGCCGCT GGCCCCGCTT ACTTTGTCGA AAAAGCCTTT
GGTCGCACCG CTGGTCGAAC AATTGGACTG ATCTTTTTAC TGGTTGTGCC CATGGGCGCC
CCCGCCGCGA TTTTGATGAC CTTTCAGTTT GTGAATGCCT TAATGCCAAT ATCGGGTTGG
TCCAAGGTCG GTGTTGAAGT ATTAGTGATT TTTGGCCTGT TCCTGATTAA TTTAAGGGGC
ATTCAAGTGT CGGCCAAGCT GCAATTTGGC TTAACGCTGT GCATAGTGGC CGTCGTTGTC
CTCTTATTTG GCGCAAGCAG TTTTCAGCCT GGTCATCTGA CAACACTTGC CAGCCATGGT
ATGCCTGAAA TGCCAACCGT GATGATTGCC GCTGGCATCG CTTTTTGGAG TTTCTTGGGC
ATAGAAGCGA TGACGCATCT GGCCGATGAT TTTCGCCGTC CGCAGCAGGA TATGATCCCC
GCTATGATGA TGGGCACTGT GCTGGTGGGC GTCATTTATG TGGCTTGTAC ACTATTACTA
CTGTTAGTAC CGACGGATAA AAGCGTCGCT ATGATCGGCG TGTTTGATCA GTTGCTCGGT
GGTTACGGCG CGCAAGTGAT TGGCGTGTTG GGGATTGCAA GTGGATTGGC AACCGTGAAC
GTGTATTCGG CCAGTGCGGC ACGTTTAGTG TGGAGCTTTA GTTGTGAAGG CATTTTGCCG
CGCTTTTTTG CGGTGAAGAA TGCCCACGGC GTACCTATTC GCGCACTGGC TGCACTGTTA
TCTGTGATGG CGAGCGTGAT AGTGCTGACT TATCTTACTG GACAAGAGTT AGAACACCTT
ATTGCATGGA GCAACGGTGT ATTTGTGGTG ATCTATTTGA TGGCTATGTT AGCGGCAGCT
AAGTTATTAC CGCGCCATAA TTGGCCACTA GTAGCGCTGG GTTGTGCGTT TTGCTTGGCA
TTAGGTTTTG CCCTAGGTGC GAGCATGTCC TATGTGTTGG TGTTGATATT AGTGGTGGCG
CCATTTCTGT GGTGGCAAAA GACCCATATC AGCCGCAAAC AAGGTTTAGC GATTCCTGAG
TAA
 
Protein sequence
MNSNSGTIGR WQGAGLMATT LLGTGVFILP QMTIEKAQSG ALVAWILLTL AIIPVALVFG 
RLASVFPHAA GPAYFVEKAF GRTAGRTIGL IFLLVVPMGA PAAILMTFQF VNALMPISGW
SKVGVEVLVI FGLFLINLRG IQVSAKLQFG LTLCIVAVVV LLFGASSFQP GHLTTLASHG
MPEMPTVMIA AGIAFWSFLG IEAMTHLADD FRRPQQDMIP AMMMGTVLVG VIYVACTLLL
LLVPTDKSVA MIGVFDQLLG GYGAQVIGVL GIASGLATVN VYSASAARLV WSFSCEGILP
RFFAVKNAHG VPIRALAALL SVMASVIVLT YLTGQELEHL IAWSNGVFVV IYLMAMLAAA
KLLPRHNWPL VALGCAFCLA LGFALGASMS YVLVLILVVA PFLWWQKTHI SRKQGLAIPE