Gene Shew185_4147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4147 
Symbol 
ID5372856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4948317 
End bp4949141 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content48% 
IMG OID640832413 
Productputative signal transduction protein 
Protein accessionYP_001368327 
Protein GI153002646 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCAG CTGCGTTACT CAATCGAGTG GATGAATTAC CCAGGTTACC CAAGGCGATC 
AGTGAACTAT TAGACGCAGT CAATGATGAT AATGCGACAG TAAAAAGTAT TGCCACTAAG
GTTGCGCACG ATCCCTTAAT CAGCGCGAGG GTATTACGCC TTGCCAACTG TGCCCACTAT
GGACGCAGTC GAGAGGTGGG TACGATCGAC GAAGCCGTGG TGCGTCTTGG GATGCAAACC
CTGCGTACTT TAGTGCTTGC ATCGGCCGTA ATTGGTGCGG TTCCTAAGTG TGAAGGAATC
GACTTAGCCC AGTTTTGGGG GCAAACCTTT GAGATTGCCC TATACAGCCA AGAAATGGCG
AAACGTTGTG GTGCTATACC TGAAGAAGCA TTCACCTGCG GTATCTTGCA CCGTATTGGC
GACTTACTGA TTGCGGCTGT GTCACCTGAA GATGCGGCGA AAATTGCTGA AGCCGTGGCG
CAGGGCAAAG ATAAGCATGA GTTTGAACGT GAGTTGCTTG GATATGATTC ACCCGATATC
GGCGCATTGC TGGCCAAAAA TTGGAAATTC ACCACAGCGT TGGTGGAAGG TATTTTATAT
CAAGATCATC CTAAGGATTC GGACCCATTC TCAAAACTTG CAGCATTACT ATGCCTATCT
TACAAAGTGC TGGATGAGTG GGATACCATT GAGGATGATG AGAAAACCAG TTGGTTATCC
CAGTTAGCCA CCAAGAAAGG ATTAAGAATG GAGATGGGTG GTTTGCGGAC TAAGTTGACT
GAGTTACGCG GTTCAGGGTT CGAAATCGGT AAAGCCTTAG CTTAG
 
Protein sequence
MDSAALLNRV DELPRLPKAI SELLDAVNDD NATVKSIATK VAHDPLISAR VLRLANCAHY 
GRSREVGTID EAVVRLGMQT LRTLVLASAV IGAVPKCEGI DLAQFWGQTF EIALYSQEMA
KRCGAIPEEA FTCGILHRIG DLLIAAVSPE DAAKIAEAVA QGKDKHEFER ELLGYDSPDI
GALLAKNWKF TTALVEGILY QDHPKDSDPF SKLAALLCLS YKVLDEWDTI EDDEKTSWLS
QLATKKGLRM EMGGLRTKLT ELRGSGFEIG KALA