Gene Shew185_4129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4129 
Symbol 
ID5373000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4927174 
End bp4928652 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content49% 
IMG OID640832395 
Productpeptidase M16 domain-containing protein 
Protein accessionYP_001368309 
Protein GI153002628 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGA TGGCAATGAA ATCGACAGCA ATGAAATCAC TTAAGATGGC ATCACTCGGG 
AAACCTTCTA AGTTAATGGC CGCATTAGCC CTAGGCACAA GTTTAGCCTT AGCGGGTTGT
GCTACGACAT CGGCGCCAAA ACGCGTTGAA ACTGGCAGCT TTGTGATGCC AAGTTACGAC
AAGTTCGTGC TGGATAACGG CTTAACTGTG TATTTAATGC CGCAGCGCGA AGTGCCTTTA
GTCACCTTAA ATGCCGTGGT ACGTGCGGGA GCTGTCAATG ACACCACCGC AGGCGTGGCG
CAAATGACGG CAGAAGGTTT GTTGCTAGGG GCGGCGGGTA AATCTAAGGC GGATATCGAG
CAGCAAGTGG ATTTTCTCGG TGCCAGTTTA GGCGCTGAAG CGGATAAAGA AGGCAGCTAT
CTCAGCGCCG ATTTTATGGC GAAAGACACT GACGTCATGC TGGGCTTATT TAGTGCGGCG
ATGTTAACGC CGGACTTTGA CGCCGCCGAG TTCGATAAAC TCAAGCAACG CGCGATTGCG
GGATTGCAGC AAGATAAAGA AAGCCCACGG GCTGTGATTG GTCGTTACTT CGATAAGCTG
GTATTTGGTG CCCATCCTTA TGGTAATGCG GCTTCGGGTA ACAGCGATTC GCTTGAACAA
GTGACAGTGT CGCAACTGCG CGCTTTCCAT AAGAGTTACT ACCAACCAGC CAATACTGCG
ATTACCGTCG TGGGTGACTT TGATGTTGCT GCGATGAAGG CCAAGCTGAC ACAAACCTTT
GGTCAGTGGA AAGGCAGCGA GAAACTGGTG CAGCCTGACT TAAATCAAGG CTTGCCTCAG
TTAACTGCGG CTAAAGTTTT GCTGGTGGAT AAACCCGATG CAATCGAAAC CACCTTTGTG
ATCGGCGGTT TAGGCATTAG TCGTGACAAT CCAGACTATG TCGGTTTAAC AGTAGTGAAC
ACTATTTTAG GTGGTCGTTT TACCTCTTGG CTTAACGACG AGCTGCGGGT AAACGCTGGC
TTAACCTATG GCGCACGCTC AGGTTTTAGC CCTTATACCG ACTCGGGTGT GTTTACTATC
AGCACTTTCA CTAAGACGGA AACCACTCAA GAAGCGATTG ATCTCGCACT GAAAACCTAT
GCTCGTTTAT GGGAAAAAGG CGTAGATCAA ACCACCTTAG ATTCGGCTAA AGCCTATGTG
AAGGGTCAGT TCCCACCTAA GTTTGAAACC TCAGGCCAGC TGGCGGGATT GTTGTCTGGC
ATGTATCTAT ACGGCTTCGA TGATAAGTTT ATCAATGAGT TCCAAACTAA GGTGGATGGT
TTGACCTTAG AAGAAACCCA AAGACTCGTG AAAACGTATT TCCCGCAAAA AGATCTGCAA
TTTGTGCTGA TTGGCAACGC GGCTAAGATT GCACCTATCG CCGCTAAGTA TGGCAAAGTG
CAAACCGTGG ATATTAAAGC CACGGGCTTT GGCCAATAG
 
Protein sequence
MKAMAMKSTA MKSLKMASLG KPSKLMAALA LGTSLALAGC ATTSAPKRVE TGSFVMPSYD 
KFVLDNGLTV YLMPQREVPL VTLNAVVRAG AVNDTTAGVA QMTAEGLLLG AAGKSKADIE
QQVDFLGASL GAEADKEGSY LSADFMAKDT DVMLGLFSAA MLTPDFDAAE FDKLKQRAIA
GLQQDKESPR AVIGRYFDKL VFGAHPYGNA ASGNSDSLEQ VTVSQLRAFH KSYYQPANTA
ITVVGDFDVA AMKAKLTQTF GQWKGSEKLV QPDLNQGLPQ LTAAKVLLVD KPDAIETTFV
IGGLGISRDN PDYVGLTVVN TILGGRFTSW LNDELRVNAG LTYGARSGFS PYTDSGVFTI
STFTKTETTQ EAIDLALKTY ARLWEKGVDQ TTLDSAKAYV KGQFPPKFET SGQLAGLLSG
MYLYGFDDKF INEFQTKVDG LTLEETQRLV KTYFPQKDLQ FVLIGNAAKI APIAAKYGKV
QTVDIKATGF GQ