| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4128 |
|---|
| Symbol | |
|---|
| ID | 5372999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 4925036 |
|---|
| End bp | 4927057 |
|---|
| Gene Length | 2022 bp |
|---|
| Protein Length | 673 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640832394 |
|---|
| Product | peptidase S9 prolyl oligopeptidase |
|---|
| Protein accession | YP_001368308 |
|---|
| Protein GI | 153002627 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.658271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAAGA CAGGCATTTT ATTACTCTGT TTACTGATAC CCTTTAGCTC GGCATTTGCA
GACCAAGGCA AACCACTCTC AGCGGAATTA CTTTGGCAAC TCAAACGTAT CGGTAGCCCG
ATTGTATCCC CCACGGGTGA ACACATCATA GCGCCAGTCA CAGAGTACGA TCTCAAAGCT
GATAAAGGCT CGACCCAGCT GTGGCGTTTC GATGGCAAGC ATAACCGAGC GATCACAGCC
AAAGGTTTAA GGGTGAGCGA GCCCGTGTTT TCCCCCGACG GCAAAACCTT GGCATTTGTG
AGTCAGCGCA ATGAAGACGA GGCGAGCCAA ATTTACCTGC TGCCGATGGA CGGTCCGGGT
GAAGCGCAGC GCTTAACCGA TATTCCCACA GGCGTTAACA GTATTAAGTG GGTTGGCAAA
CATCTGTATT TCATCAGTAA TATCTTTCCC AATCAAAGCT GGGAAGAAAT GAAAACCCAG
CTCGCCACAG ATACAGACAA TAAGGTTTCC GCCCATCAAT GGAACGCCTT GCCCTATTCC
CAATTTGATC ACTGGTTAGA TGAACGTCGT CAAGCCCACG TATTTAGAAT TCCGGCCAAA
GGCGGTAATG TCGAAAACAT CACCCAGCCT GCGGGCCATG AATTACCACG ATCAGATCAA
AGCAGTGCAA GCTATGGTGT TTCCCCCAAT GAACGCTGGA TCGCCTTCAA TGCCTATGGC
TCAGAGAATA AAGTCGATCC TAAAATTGAT ATATTTCTCG CTGCGATTGG AGGCAACAAG
GCCGAAAATC TCACTGCTGA TAATCAAGCG CCAGATCTGA ATCCTAGCTT TAGCCCTAAC
GGTAAAACGC TCGCCTTTAC CCGCCAAAAA ATCCCCGGTT TCTACGCCGA TACCTCAAGG
CTGATGCTGC TGGATATCGA CAGCCGTAAA CTCACAACAC TCACATCTGA CTGGGACCGT
TCTGTCTCTC AATTCAGTTG GACACCCGAC AACAAGGGCT TTTATGCCAC GGTAGAGGAC
GCCGCCACAA ACCGCATTTA CTCTATCGAT GCCAAGAGCG GCAAAGTAAA AGCCATCACA
GAGGCGACCG ATTTTAGCCA ACCCGCCATA GGCAAAGACG GCGAACTGAT TGCCACCAAT
CAGAGCTTCT TGTATCCCGC TCGCTTGGTC AGCATCAATC CCCGCAATGG CAAGATTGAG
CGCCTAGAAA ATTTTAACGA CGATATTCTC AAAGATGTCG ACCTAGGTAC CTATGAATCC
GTCACCTACA AAGGCTATCA AGGTAAAGAT ATTCAAATGT GGGTTCACTA TCCCGCAGGG
TTTGATCGTA GCAAAAAATA CCCATTGTTT ATGCTCGTCC ACGGCGGTCC ACACAATGCC
ATTACCGACG GTTTCCATTA CCGTTGGAAC GCGCAAACCT TTGCTTCTTG GGGTTATGTC
ACTGCGTGGC CAAACTTCCA CGGTTCGAGC GGCTTTGGTC AGGAATTTGC CGATTCCATC
AATCCCGATT GGAAGACAAA ACCCCTTGAG GATGTGCTCA AGGCGGCAGA CTGGTTTAAA
CAACAAAGCT GGATAGACAG TGATCGCATG GTGGCGGGTG GTGCAAGTTA TGGTGGTTAC
CTGACCTCGA TTATCTTAGG TCAGCCGCAT CCCTTTAAAG CACTGCTGAT CCATGCTGCG
GTTTACGACA TGTATGCACA AATGGCGTCG GACTTTGCCG TACACAGCAC CCGATTTGGC
AACTATTGGG ATAATCCAGA ACTGTATAAA GCCATTTCGC CCCATTACTT TGCGGCTAAC
TTCAACACTC CAACCTTAGT CAGTCATGGC CAACTCGATT ACTTAGTGCC GGCGACCCAA
GGTTTTGAGC TGTTCCACAC CCTGCAAAGT CGACATGTTG AATCGCGGAT GATTTATTTC
CCCGATGAAA ATCATTGGAT TATGAAGCCC AATAACTCAG TCTACTGGTA TAACGAAGTG
AAGAAGTGGA TGACCCACTT TGCCGAACCT GGCGCGCGTT AA
|
|---|
| Protein sequence | MKKTGILLLC LLIPFSSAFA DQGKPLSAEL LWQLKRIGSP IVSPTGEHII APVTEYDLKA
DKGSTQLWRF DGKHNRAITA KGLRVSEPVF SPDGKTLAFV SQRNEDEASQ IYLLPMDGPG
EAQRLTDIPT GVNSIKWVGK HLYFISNIFP NQSWEEMKTQ LATDTDNKVS AHQWNALPYS
QFDHWLDERR QAHVFRIPAK GGNVENITQP AGHELPRSDQ SSASYGVSPN ERWIAFNAYG
SENKVDPKID IFLAAIGGNK AENLTADNQA PDLNPSFSPN GKTLAFTRQK IPGFYADTSR
LMLLDIDSRK LTTLTSDWDR SVSQFSWTPD NKGFYATVED AATNRIYSID AKSGKVKAIT
EATDFSQPAI GKDGELIATN QSFLYPARLV SINPRNGKIE RLENFNDDIL KDVDLGTYES
VTYKGYQGKD IQMWVHYPAG FDRSKKYPLF MLVHGGPHNA ITDGFHYRWN AQTFASWGYV
TAWPNFHGSS GFGQEFADSI NPDWKTKPLE DVLKAADWFK QQSWIDSDRM VAGGASYGGY
LTSIILGQPH PFKALLIHAA VYDMYAQMAS DFAVHSTRFG NYWDNPELYK AISPHYFAAN
FNTPTLVSHG QLDYLVPATQ GFELFHTLQS RHVESRMIYF PDENHWIMKP NNSVYWYNEV
KKWMTHFAEP GAR
|
|---|
| |