| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4098 |
|---|
| Symbol | |
|---|
| ID | 5370955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4883032 |
|---|
| End bp | 4884306 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640832361 |
|---|
| Product | competence/damage-inducible protein CinA |
|---|
| Protein accession | YP_001368278 |
|---|
| Protein GI | 153002597 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
[COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain
[TIGR00199] competence/damage-inducible protein CinA C-terminal domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTAG AGATGATTTG TACTGGGGAA GAGGTGTTGG CGGGACAGAT TGTTGATACC
AACGCCGCTT GGTTTGCCAG TACTATGATG GAGCATGGTG TCGAGATCCA GCGTCGAGTG
ACTGTCGGCG ATCGCCTCGA GGATTTGATT GCAGTTTTCC AAGAACGTAG CTTACATGCC
GATGTTATTT TGGTTAATGG TGGTCTCGGG CCGACGAGTG ACGACATGTC AGCTTTAGCG
ATGGCGAAGG CTAAGGGCGA ACCATTGGTC GAGAATGCGG AGTGGCGTGA GCGTTTAGAA
GACTGGTTTA CCCGTAATAA CCGTGAAATG CCTTTAAGTA ATCTCAAGCA AGCTATGCTG
CCAGCCTCAG CTGTGATGGT TGATAACCCC GTGGGAACGG CCTGTGGCTT TAGAGTTAAG
CTTAACCGCG CGTGGTTATT CTTTACACCG GGCGTGCCTT TTGAGCTTAA GCACATGGTT
ACAGAGCAGT TTGTGCCTTT TATTCGCGAT GAGTTTAATC TTGATTCCAA GGTCGCATTA
AAGAAATTAT TAACGATAGG CCAAGGTGAG TCGGCGTTGG CGGATAAGTT AGAGCCATTA
GAGCTGCCTG AAGGCATTAC TATTGGTTAC CGTTCTTCTA TGCCGCATAT TGAGATTAAG
ATTTTTGCCC GTGGCGAGAA GGCGATAGCG GTATTACCTC GGGTCGCTGG GCACATCAAA
ATGGTGCTGG GCACTGCGGT AGTCGCGGAA GATAAAGCCA CTCTTGCCGA AGAAATTCAT
TATAAGTTAC TCAACTCCGG CTTGACCTTA AGCGTTGCAG AATCCTGCAC TGGCGGCATG
ATCACCAGTC AGTTGGTTGA TTTTTCTGGT AGTTCATCTT ACTTGCAGCA CGGATTAGTG
ACTTACAGTA ATGAATCTAA AGTGCGCGTG TTAGGTGTGA ATCCTTCAAC ATTAGATGAT
CATGGCGCTG TCTCCATTGC GACTGTGGAA GAAATGGCAA AGGGGGCAAG ACAAATATTG
GACAGTGACT ATGCGCTGGC AACCAGTGGT ATTGCGGGAC CCGATGGTGG CACAGACGAG
AAGCCTGTGG GCACTGTGGC GATTGCCTTA GCAACTCGCG GCGGCGTTTA TAGTCAGATG
ATCAAGCTAC CACGACGTTC GCGGGATCTG GTGCGTAGCC TAAGTGCTGC GGTGGCTTAC
GATATGTTAA GACGTGAGCT TTTAGCTGAA GCCGTGATTG TCGATTATCA GTCGATTGGG
CGATTCAGTA AGTAA
|
|---|
| Protein sequence | MKLEMICTGE EVLAGQIVDT NAAWFASTMM EHGVEIQRRV TVGDRLEDLI AVFQERSLHA
DVILVNGGLG PTSDDMSALA MAKAKGEPLV ENAEWRERLE DWFTRNNREM PLSNLKQAML
PASAVMVDNP VGTACGFRVK LNRAWLFFTP GVPFELKHMV TEQFVPFIRD EFNLDSKVAL
KKLLTIGQGE SALADKLEPL ELPEGITIGY RSSMPHIEIK IFARGEKAIA VLPRVAGHIK
MVLGTAVVAE DKATLAEEIH YKLLNSGLTL SVAESCTGGM ITSQLVDFSG SSSYLQHGLV
TYSNESKVRV LGVNPSTLDD HGAVSIATVE EMAKGARQIL DSDYALATSG IAGPDGGTDE
KPVGTVAIAL ATRGGVYSQM IKLPRRSRDL VRSLSAAVAY DMLRRELLAE AVIVDYQSIG
RFSK
|
|---|
| |