Gene Shew185_4096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4096 
Symbol 
ID5370953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4879692 
End bp4882361 
Gene Length2670 bp 
Protein Length889 aa 
Translation table11 
GC content50% 
IMG OID640832359 
Productphosphoenolpyruvate carboxylase 
Protein accessionYP_001368276 
Protein GI153002595 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGTAA CCAAGGCAGA CAATATGACC GATATGTATG CGTCATTAAG ATCGAACGTG 
AGTATGTTAG GACAAATCCT CGGTGACACT ATGCGCACCC ACCTCGGGGA CTCTTTTCTC
GAGAAGGTTG AACAGATCCG TAAACTTGCT AAAGATTCAC GCCGGGGCGA TCAAGCCGCT
AGAGAGCAAA TGCTCGAGTT ACTTACCGCC CTGCCAGACG AAGAATTAGT TCCGTTTGCA
AAGGCATTTA ACCAGTTCCT CAACTTAGCT AATTTATCTG AACAATTTCA TACCATTAGC
CGCAACTGCG ACGAACTCGT CTGCGTACCA GATCCCGTGG AACAGCTGCT AGGCCGCATG
TTAAATGGCC GTGTAGACCA AACGAAAATG CTCGACTGCC TTAAGACACT GGATATCGAT
CTAGTGCTGA CAGCGCATCC CACTGAAATT TCCCGTCGCA CCCTGATCCA AAAGTACGCC
GCCATTGTCG ACTGCTTAAC TGAACAAGAA AACGATCAGT TATCAGATAG AGAGCGTCAG
CAAATCAGTC TGCGCCTACG CCAATTAATC GCGCAAATCT GGCACACCAA TGAGATCCGC
CGTGAGCGCC CAACACCTGT TGATGAGGCC CGCTGGGGAT TATCGACTAT TGAAGAGTCA
CTCTGGCATG CGGTGCCAGA CTTCTTAAGA CAGCTTAACG ACCAAGTGCA ACAACGCACG
GGTCAACAAT TACCGATTGA TATCGCACCA GTGCGTTTTT CAAGCTGGAT GGGCGGCGAT
CGCGACGGCA ACCCCTTTGT GACCGCGAAA GTCACCCAAG AGGTGCTCGA TCGCAACCGT
CATGCCGCCG CCAGATTATT CTTAAAAGAC ATAGTCCTGC TGGTTGGCGA ACTGTCGATG
GAAGAAGCCA ATGATGAGTT AAAGGCTTAC ACCAACAACA GCTGCGAGCC ATACCGCCAC
GTGTTGCGAT CTATTCGTCA AAGACTGCGT GACACCATAG ATTATTTAAA TGCACGCATC
GAAGGCCACA ATCCTGAAGT CGATAAGTCG AGCCTGATTT GGCAAGAAAG CGATCTCAAA
GCGCCGTTAG AAATGCTTTA TAAGAGTTTG ACCGACTGCG GTATGCGCTT AATCGCCAAC
GGTTTATTGC TCGATATTCT CCGTCGCCTC GCCTGTTTTG GCATTCACAT GCTCAGACTC
GACATTCGCC AAGACGCCAG CCGTCACAGC GATGTGCTCG CAGAATTAAC TCGCTATCTC
GGCATGGGTG ATTTCAACCA TTGGGATGAA ACCGAGAAAC AAGCTTTCCT ATTACGCGAA
CTCAGCAACC GTCGTCCACT GATCCCAAGT AACTGGCAAC CGTCAGCCGA TGTGGCCGAA
GTGCTTAATA CCTGTCGTTT GATCGCTAAA CATCCGGCTA AGGCACTCGG ATCCTATGTG
ATTTCGATGG CGGGTAAGCC ATCGGATGTA TTAACGGTTT TACTGTTACT CAAAGAAACG
GGCTGTTCGC ACCCAATGCG CGTAGTGCCG CTATTTGAAA CCTTAAGCGA CTTAAACAAC
GCCGCAGCAT GTATTACCGA TTTACTCGAT ATCGACTGGT ATCGTGGTTA CACCAAGGGC
ATGCAAGAAG TCATGATTGG CTACTCTGAC TCTGCTAAAG ATGCCGGCGT AATGGCGGCG
GCTTGGGCTC AGTATCACGC TCAAGAGCAG TTAGTGGCGG TCTGTAAACA AGCGGGCGTC
AAGCTCACAC TATTCCATGG CCGTGGCGGC AGCATTGGTC GCGGCGGCGG TCCTGCACAC
AAAGCGATTC TATCCCAACC TCCGGGGTCG GTAGATGGCC GTATTCGTGT CACTGAGCAG
GGCGAAATGA TCCGCTTCAA GTTTGGCTTG CCAAAACTCG CGGTTCAAAG CTTAGCCTTG
TATACCTCTG CCGTATTGGA AGCAACCCTG TTACCACCGC CAGAGCCTAA ACAAGAATGG
CGCGATTGCA TGCAACGTAT CGCTGAAGAA TCAGTGGGAG CTTATCGTGG AATAGTGCGT
GATGAACCTG ATTTTGTGGC TTATTTCCGT GCGGCAACAC CCGAAGTGGA ATTAGGAAAG
CTGCCACTCG GCAGCCGCCC AGCTAAACGT CGTGTCGATG GTGGGATTGA AAGCCTACGG
GCTATTCCAT GGATTTTTGC TTGGTCACAA AACCGTTTGA TGTTACCTGC ATGGCTTGGC
GCCGGTGAAG CGCTACAAGC CGCCTGTGAA CGCGGTGAAA TGGGCTTATT ACAAGAGATG
GAACGGGAAT GGCCTTTCTT CAGCACTCGC ATTTCAATGC TAGAAATGGT CTACGCCAAG
GCGGAACCTA ATTTAGCCCG CTACTACGAA ACCTGTTTAG TACCAAAAGA CTTGCATCAC
TTAGGCGAAA CCTTGCGCCA ACGCTTAGAT CTGGGCATTA AAGTCGTGCT TGAACTGACA
AAATCAGATA GCTTAATGGC GCATACACCG TGGAATCGCG AGTCAGTAAA ACTGCGAAAT
CCGTATATCG ATCCATTAAA CTTCTTACAA ACTGAGCTAT TAGCGCGGAC ACGTAAGGAA
ACAACCGAAA CTCCCGCGTC TGAACATGTG CAGCTAGCGC TAATGCTGAC TATTGCAGGT
GTGGCAGCGG GAATGAGAAA CACTGGTTAA
 
Protein sequence
MVVTKADNMT DMYASLRSNV SMLGQILGDT MRTHLGDSFL EKVEQIRKLA KDSRRGDQAA 
REQMLELLTA LPDEELVPFA KAFNQFLNLA NLSEQFHTIS RNCDELVCVP DPVEQLLGRM
LNGRVDQTKM LDCLKTLDID LVLTAHPTEI SRRTLIQKYA AIVDCLTEQE NDQLSDRERQ
QISLRLRQLI AQIWHTNEIR RERPTPVDEA RWGLSTIEES LWHAVPDFLR QLNDQVQQRT
GQQLPIDIAP VRFSSWMGGD RDGNPFVTAK VTQEVLDRNR HAAARLFLKD IVLLVGELSM
EEANDELKAY TNNSCEPYRH VLRSIRQRLR DTIDYLNARI EGHNPEVDKS SLIWQESDLK
APLEMLYKSL TDCGMRLIAN GLLLDILRRL ACFGIHMLRL DIRQDASRHS DVLAELTRYL
GMGDFNHWDE TEKQAFLLRE LSNRRPLIPS NWQPSADVAE VLNTCRLIAK HPAKALGSYV
ISMAGKPSDV LTVLLLLKET GCSHPMRVVP LFETLSDLNN AAACITDLLD IDWYRGYTKG
MQEVMIGYSD SAKDAGVMAA AWAQYHAQEQ LVAVCKQAGV KLTLFHGRGG SIGRGGGPAH
KAILSQPPGS VDGRIRVTEQ GEMIRFKFGL PKLAVQSLAL YTSAVLEATL LPPPEPKQEW
RDCMQRIAEE SVGAYRGIVR DEPDFVAYFR AATPEVELGK LPLGSRPAKR RVDGGIESLR
AIPWIFAWSQ NRLMLPAWLG AGEALQAACE RGEMGLLQEM EREWPFFSTR ISMLEMVYAK
AEPNLARYYE TCLVPKDLHH LGETLRQRLD LGIKVVLELT KSDSLMAHTP WNRESVKLRN
PYIDPLNFLQ TELLARTRKE TTETPASEHV QLALMLTIAG VAAGMRNTG