| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4088 |
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| Symbol | |
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| ID | 5372478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4869104 |
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| End bp | 4869688 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640832351 |
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| Product | fimbrial assembly family protein |
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| Protein accession | YP_001368268 |
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| Protein GI | 153002587 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAACA TAAACCTACT CCCTTGGCGA GAAGAGGCGA GAGAAAAACA AAAGCGCGAT
TATATTGGTA TTTTAGCTGC GGTATTTTTA GCGTCGGCGA TTTTAGTCTA TGTGGCAGTA
TCTCTATTGG ACGTTATGAC TGATGAGCAG AAAGCGCGTA ATAGTTATTT GCAATCGGAA
ATTAGCTTGC TCGAAACACA AATTTCTGAG ATTAAGAAAA TTACCGAGCG TAAGAAAGAC
ATTGAGCGTC GCACCGAAAT TATTCTGAAT TTACAACAAT CCCGTAATTT ACCTACTCAT
GTGTTAGATG AGCTAGTGCG AATAGTGCCC CCTGGAATAT ACCTTTCTAG CTTAGAGAAA
AAGGGCAGTT TGTTACTGAT AGAAGGGCGT AGCGAATCAA ATAATAACGT TGCTAATATG
ATGCGTAAGG TAAAAACCTC TGAATGGCTA ACCGATCCGA ATATGCAATC GATCGTGACC
CAAAATGAAG AATTACGGCA ATTACAGCGA TTCAGTTTAA GAGTCACGAT TAAAGGCGCG
AATGTAGGTG AGCCTGAGAA AATGACAAAA GGAGCGAGTA AATGA
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| Protein sequence | MANINLLPWR EEAREKQKRD YIGILAAVFL ASAILVYVAV SLLDVMTDEQ KARNSYLQSE
ISLLETQISE IKKITERKKD IERRTEIILN LQQSRNLPTH VLDELVRIVP PGIYLSSLEK
KGSLLLIEGR SESNNNVANM MRKVKTSEWL TDPNMQSIVT QNEELRQLQR FSLRVTIKGA
NVGEPEKMTK GASK
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