| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4074 |
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| Symbol | |
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| ID | 5370405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4857234 |
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| End bp | 4858106 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832338 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001368255 |
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| Protein GI | 153002574 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAGC TCCCACCATT ACGCGCTCTG CAAGTGTTTG AGGCCGCCGC CAGACAGCAG
CATTTTTCTA AGGCCGCCGA TGAACTGTGC ATCACCCAAA GTGCGGTTTC TCACCAAGTG
CGTGTATTAG AAGAGTATTT TGGCGAGCAA CTGTTCGACC GTCAGGGGCG TAAACTGCAG
TTAACCCCAA AAGGACACGG ACTATTTCTA GAGTTAGAGC GGATATTCAA CGAGTTAAGT
GATCTTAATT TGAAGGTTCG CGACACGCCC AATCAGCAGC TGTGCTTAGC TGTTTACAGT
TCCTTCTCGG TGAAATGGTT GATCCCCAGA CTCACCGATT TTCGCCGCCA ATATCCGAGC
GTAAAAATCC GCCTCGAGAT GATCACCCAA GATCCTGATC TCAGCACCAG TACGGCGGAT
ATCTTTATCG CAGGTAAACT GAATCAACGC GGCTATTGGC AACAGTTACT CCATAAAGAG
CGGTTAATCC CAGTGTGCAG CCCAAATTTC TACCTTAAAT GGCGCGACAT TAGCCTGAGC
AATTTCCAGC AACAAGCCCT GCTGGTTGTC GATGAAGGCC CACTCGGACT CGACTGGCAC
AAATGGTCAT CGGCACACCA GATCCCACTC GATAACGAAC AACAGCATGT GTTTAGTCAT
ATTGTGATGG CGATTGAGGC GGCGATTGCA GGCCAAGGCT TAGCCCTAGC GCCGGACTTT
ATGGTGGCAG GTGATATCAC CACGGGGCGT TTGGTCGCCT TGAATCTTCC CGATGTGCAT
ACTGGATTTG AATTTACTTT CTTTTGTAAG CAACGCCGTT TATCAGAACC TGCGATTGCT
GCCTTCTCCT CTTGGCTAAA ATCACAGGCC TAA
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| Protein sequence | MRKLPPLRAL QVFEAAARQQ HFSKAADELC ITQSAVSHQV RVLEEYFGEQ LFDRQGRKLQ
LTPKGHGLFL ELERIFNELS DLNLKVRDTP NQQLCLAVYS SFSVKWLIPR LTDFRRQYPS
VKIRLEMITQ DPDLSTSTAD IFIAGKLNQR GYWQQLLHKE RLIPVCSPNF YLKWRDISLS
NFQQQALLVV DEGPLGLDWH KWSSAHQIPL DNEQQHVFSH IVMAIEAAIA GQGLALAPDF
MVAGDITTGR LVALNLPDVH TGFEFTFFCK QRRLSEPAIA AFSSWLKSQA
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