| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4057 |
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| Symbol | |
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| ID | 5373027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4839070 |
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| End bp | 4840413 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832320 |
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| Product | low affinity gluconate transporter |
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| Protein accession | YP_001368238 |
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| Protein GI | 153002557 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATA TGTCATTGAT TCTGACAGCG CTGGGTTCAA TCGCCCTGCT ACTGTTCTTA
GTGATGAAAG TGAGATTACA TGCAGTGGTA TCGCTGATAC TGGTGTCGAT CATTGCCGGC
CTTTTCTCTG GCATGAACCC AGCCGATATC ACCAATACTA TTCAACAAGG TATGGGGGGA
ACACTGGGCT TTGTGGCGGT GGTGGTCGCT TTGGGGGCGA TGTTTGGTCG CGTCATGGAA
GAAACTGGCG CACTCGATCA GATAGCCCAT ACACTGCTGA ATAAATTTGG TAACGACAAA
GCCCACTGGG CGATGACCTT TACTGGTTTT ATCTGTGCGC TCCCCCTCTT CTTCGACGTT
GCTGTGGTGC TGCTGATTGG CATCGCCTTT GCCGTGGTTC GTAAAGGGGG CGGTAGCGTG
GTTAAAATTG GTATTTCGTT GCTCGCGGGT ATTGCCACCT GTCAGGCGTT TCTTATTCCT
GCACCTGGGC CTATTTTGGT CGCTTCCCAG CTCAATGCCG ACTTTGGCTA CATGATAGTC
TTCGGTCTGC TGGCATCGAT TCCTGCGATG ATTCTTGGCG GCCCTCTCTT TGCCAGTCTC
ATCTCGCAAA AAGTCCATGT TGAGCTACCA GCCCACGAAC AGCAAGAAAA TGGCGAACGA
GAAGGCGGAC CTATCCCCTC ATTCGCGCTC TCAATCAGTA TTGTGATTTT TCCACTGCTG
CTTATCGGTT TAAAGACTGT GGTGTCGCGC TTTATTGATG AAAAATCCGA TCTGCATAAT
TGGCTCGCCT TGATAGGTCA TCCTTTCACC GCCATTCTGC TAGCCTGTTT AATCGCATTT
TATGTGCTGG GCGTGAGACG TAATATTCCC AATGACCGCA TCATGGAAAT CTGCAGCAGT
GCGCTCCAAC CTGCTGGGGT TATTATTCTC GTCACCGGTG CTGGCGGCGT GTTCAAGCAA
GTGCTGATTG ATTCGGGTGT CGGCGATGCG TTAGGGAATA TGTTGGCAGG TTCGGGATTA
CCGATTGTGA TACTGGCATT TATTTTGTCG GCTTCGGTGC GCGTTATCCA AGGTTCGGCA
ACCGTGGCCA TGTTAACGGC TTGCGGCCTT ATCATCCCGA TACTTGAACC ACTAAACTTA
GATGGTGCTC AATTGGCGGC GATTACGATT GCTATTGGCG GTGGTTCGAT TGTGCTCTCG
CACGTTAATG ACTCAGGCTT CTGGCTCGCT AACCGTTTTC TTGGATTATC AGAAAAACAA
ACGCTGCAAA CCTGGACGGT AATGGAAACC ATTATTGGTA CGACGGGCGG CATAGTCGCA
GTCATCATCT CTGCGTTTCT TTAA
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| Protein sequence | MSDMSLILTA LGSIALLLFL VMKVRLHAVV SLILVSIIAG LFSGMNPADI TNTIQQGMGG
TLGFVAVVVA LGAMFGRVME ETGALDQIAH TLLNKFGNDK AHWAMTFTGF ICALPLFFDV
AVVLLIGIAF AVVRKGGGSV VKIGISLLAG IATCQAFLIP APGPILVASQ LNADFGYMIV
FGLLASIPAM ILGGPLFASL ISQKVHVELP AHEQQENGER EGGPIPSFAL SISIVIFPLL
LIGLKTVVSR FIDEKSDLHN WLALIGHPFT AILLACLIAF YVLGVRRNIP NDRIMEICSS
ALQPAGVIIL VTGAGGVFKQ VLIDSGVGDA LGNMLAGSGL PIVILAFILS ASVRVIQGSA
TVAMLTACGL IIPILEPLNL DGAQLAAITI AIGGGSIVLS HVNDSGFWLA NRFLGLSEKQ
TLQTWTVMET IIGTTGGIVA VIISAFL
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