| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4054 |
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| Symbol | potE |
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| ID | 5370242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4835350 |
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| End bp | 4836669 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640832317 |
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| Product | putrescine transporter |
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| Protein accession | YP_001368235 |
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| Protein GI | 153002554 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAT CAGAAAATAA AATTGGCGTC GTCCAATTAA CTATTATCAC CATAGTCAAC
ATGATGGGTT CGGGCATTAT TATGCTGCCA ACCCAATTAG CTCAAGTCGG TACTATTTCG
ATTTTATCTT GGTTAGTCAC AGCGGCGGGT TCAACTGCCC TCGCCTACGC TTTTGCCAAG
TGCGGTATGT TCAGTAAGAA ATCCGGTGGT ATGGGCGGTT ATGCCGAATA TGCTTTCGGC
CGCTCAGGCA ACTTTATGGC TAACTACACC TATGCCGTTT CGCTGCTCAT CGCCAACGTC
GCCATTGCGA TCTCAGCCGT GGGTTATGCC GCCGTGCTGC TCGATGTAAA CCTAAGCCCT
ATGGCCATTT GTCTTGCAAC CATTGGTGTG CTTTGGCTGG CAACCATTGC TAACTTCGGT
GGTGCCCGTA TCACAGGTCG TGTGAGTAGC GTGACTGTGT GGGGGATTAT TCTGCCCGTG
ATTGGCGTGT CGTTAATTGG TTGGTTCTGG TTCGACATCG ACCTCTACAA AGGCGCATGG
AACCCGCATG ATATGCCATT CTTCAAAGCG TTAGGCGGTT CTATCGCGAT GACTTTGTGG
GCATTCCTTG GTTTAGAATC GGCCTGTGCA AACTCAGAAG CCGTCGATAA TCCAGAGAAA
AACGTCCCTA TCGCAGTAAT GGGCGGTACT TTAGGCGCGG CGGTAATTTA TATCGTCTCT
ACTAACGTCA TTGCCGGTAT TGTGCCAAAC GCCGAACTTG CCATGTCAAA CGCGCCCTTC
GGTTTAGCCT TCGCGCAAAT GTTTAACCCT GTGGTCGGTA AAATCGTGAT GGCCTGCGCC
ATTATCTCTT GTACTGGCTC GCTGTTAGGT TGGCAGTTCA CTATTGCCCA AGTGTTTAAA
GCCTCTGCCG ATGAAGGATT CTTCCCTAAA ATCTTCTCTA AAGTCAGTAA AGCCGATGCG
CCAATTTGGG GTATGACCAT TATCGTTTGT ATTCAAACCG TTTTATCTCT GATGACTATT
AGCCCATCAC TGAGCAAACA GTTCGAAGCA CTCGTTAACC TCGCCGTCGT CACCAACATT
GTGCCTTACA TCCTATCGAT GGCCGCCCTT GGCATAATGC AAAGACAGCA AAAAGTACCG
GTTAATAAAG CCCGTATTGC CAACGTGATT GCCGTGATCG GTGCCTTATA TAGCTTCTAT
GCCCTGTATA GCTCAGGCGA AACCGCAGTA ATGCTTGGCG CCATGGCCAC CTTCTTCGGT
TGGACTATCT TCGGCGTGAT CTCAAACAAA GCACCCGTTA CCGATACGCG TCCAGCCTAA
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| Protein sequence | MSKSENKIGV VQLTIITIVN MMGSGIIMLP TQLAQVGTIS ILSWLVTAAG STALAYAFAK
CGMFSKKSGG MGGYAEYAFG RSGNFMANYT YAVSLLIANV AIAISAVGYA AVLLDVNLSP
MAICLATIGV LWLATIANFG GARITGRVSS VTVWGIILPV IGVSLIGWFW FDIDLYKGAW
NPHDMPFFKA LGGSIAMTLW AFLGLESACA NSEAVDNPEK NVPIAVMGGT LGAAVIYIVS
TNVIAGIVPN AELAMSNAPF GLAFAQMFNP VVGKIVMACA IISCTGSLLG WQFTIAQVFK
ASADEGFFPK IFSKVSKADA PIWGMTIIVC IQTVLSLMTI SPSLSKQFEA LVNLAVVTNI
VPYILSMAAL GIMQRQQKVP VNKARIANVI AVIGALYSFY ALYSSGETAV MLGAMATFFG
WTIFGVISNK APVTDTRPA
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