| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4045 |
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| Symbol | |
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| ID | 5373376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4825773 |
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| End bp | 4826930 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640832308 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001368226 |
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| Protein GI | 153002545 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAT CAGTCCAAAA CATGATAGAA CTCGATTCTC CAACGCTAAT CATCGCACAA
GCTATTGTTC AATGGCTGCT TGCAATATTA CTGATGGCTG AGAGGGGAAT GGATAAAGGG
ACAAAATACT GGGTTATTGC ACTGTTTATC CACGGGATTG CTAATTTACT ACTGTTTTCT
CGTCCTTATT TACCTCCCGT TGTTGCGGTT ATTTTTTATA ATTTTTGTGT CACTACTGCG
TTCTCATTCA GTTATCTGGC GTTTGCTCGC TTAGTGGGTA AACAAGCGCC GCTTTGGCTC
GTTTTATTTC CCATATTCGT GATGATCCTG ACTATGTCTA TTTATATTGA TGACATAGCC
ATGCGAGTTA TTTTTGCAAG TATTATTACG GGTACTCAAT TGATTTTAAT GGCATTTATT
TTAACGGGAG GCAATTGGTC TGGAAGTGAA AAGCTAAAGG GCTGGTTGAT GTATTCTACT
GGCTTATTCG GGATAGGCTT TATCGTAAGA GCCTTATTTT GTTATGTAAA ACCAGAATTA
TTTATTCATT TAGTCGCCAA AAGTTCTTTT CAGAGTGGAT TAGTGATTGC TGGAATGATT
TATATCATTT TCAGCACGGT TGTCATTCTG TTAGTTAGAT TGGATAGATT AAACAAAGAG
TTATCCACAT TAGCTTCGCA GGATAGTTTG ACGGGTTTAT TTAACCGAAG GGCTTTTATG
CATAATGCGA CGAGTATCAT CGCCAGTGAA AACTTTCCCG TTAGTGTGCT TATGTTAGAT
CTTGATAATT TTAAGAAAAT TAATGACGTA CACGGACATA ATGTCGGCGA TACTGTGCTT
AAGCTTTGTG CTGATGCTTT GCAAGATGGA CTAAAGCAAT ATGGCATTAT TGGCCGTTTC
GGTGGCGAAG AGTTCGCCGC CATTTTACCC AGAGCGGATA GCGAACAAGC ATTAGCTGTA
TCCGAAAAAC TTCGATTAGC TATTGAAACA ATTAATGTAA ATCCAGATAT ACGGTTATCA
ATTAGTATTG GTGTGGCGAC GTCTAGTAGT GTTTCGAGTA TTGAGCCTTT GCTTATTCGG
GCCGATAAGG CTTTGTATGA GGCTAAATCT AAAGGTCGCA ATCAGGTAAT TCATGCAGAT
CTGTTAGCAC TTAATTAG
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| Protein sequence | MNLSVQNMIE LDSPTLIIAQ AIVQWLLAIL LMAERGMDKG TKYWVIALFI HGIANLLLFS
RPYLPPVVAV IFYNFCVTTA FSFSYLAFAR LVGKQAPLWL VLFPIFVMIL TMSIYIDDIA
MRVIFASIIT GTQLILMAFI LTGGNWSGSE KLKGWLMYST GLFGIGFIVR ALFCYVKPEL
FIHLVAKSSF QSGLVIAGMI YIIFSTVVIL LVRLDRLNKE LSTLASQDSL TGLFNRRAFM
HNATSIIASE NFPVSVLMLD LDNFKKINDV HGHNVGDTVL KLCADALQDG LKQYGIIGRF
GGEEFAAILP RADSEQALAV SEKLRLAIET INVNPDIRLS ISIGVATSSS VSSIEPLLIR
ADKALYEAKS KGRNQVIHAD LLALN
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