Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4031 |
Symbol | |
ID | 5371748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4814779 |
End bp | 4815132 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640832294 |
Product | endoribonuclease L-PSP |
Protein accession | YP_001368212 |
Protein GI | 153002531 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATTA CCCGTTTAGA CGTTGGCACC CGCATGAGCA GCATAGTCAT TCACCAAGGT ACTGTGTATC TGTGTGGTCA AGTGGCCAAG GATAAGTATC AAGATATCAC TGAACAAACC GTCACTATGC TTGAAGAAGT CGATACCTTG TTGGCGCAGG CGGGGAGTGC GCGTGAGCAT GTATTGTCAG CGACTATCTA TCTGAAAGAC ATGGGTGATT ACGATGCGAT GAATGCCGTA TGGGATGCTT GGGTGCCTAA AGGCCATGCG CCAGCCCGCG CTTGCGTGCA AGCTGCCATT GCTGAACCGG AATATTTGGT TGAAGTGTCT GTGATAGCGG CGGTCGCGGT TTAA
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Protein sequence | MSITRLDVGT RMSSIVIHQG TVYLCGQVAK DKYQDITEQT VTMLEEVDTL LAQAGSAREH VLSATIYLKD MGDYDAMNAV WDAWVPKGHA PARACVQAAI AEPEYLVEVS VIAAVAV
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