| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4022 |
|---|
| Symbol | |
|---|
| ID | 5371380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 4801218 |
|---|
| End bp | 4802345 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640832287 |
|---|
| Product | methylcitrate synthase |
|---|
| Protein accession | YP_001368205 |
|---|
| Protein GI | 153002524 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAG CTAAAAAACT AAGCGGTGCA GGATTACGTG GCCAGAGCGC AGGCGAAACA
GCATTGAGCA CAGTGGGCGT GTCAGGCAGC GGCCTAACGT ACCGCGGTTA TGATGTGAAA
GATCTCGGTG AAAATGCCAC CTTCGAAGAA GTCGCCTATC TCATTCTTTA CGGCGAGCTG
CCCACTCAAG CCCAGCTTGA TGCCTACAAA ACCAAACTCA AAGGCCTTCG CGGTCTGCCG
CAAGCCTTAA AAGAAGTATT AGAGCGCATT CCTGCTGAAA CTCATCCTAT GGATGTGATG
CGTACTGGCT GCTCTATGCT AGGCAACTTA GAAGCCGAAC ACAGCTTTGC CGATCAGAGT
GAAATCACCG ACCGCCTATT GGCTGCGTTC CCATCGATCA TCTGTTACTG GTATCGCTTT
AGTCACGATG GCGTGCGTAT CGACACTGAA ACCGATGACG ATCAAATTGG CGCACACTTC
CTGCACTTAT TACATGGTAA AGCGCCGTCG GCACTGCATG CTAAAGTAAT GGACGTATCG
TTAATTCTTT ATGCAGAACA TGAATTTAAC GCATCAACCT TTACCGCTCG CGTCTGTGCT
TCAACCCTGT CAGACATGCA TTCATGCGTC ACTGGCGCCA TTGGTTCACT GCGCGGTCCG
CTGCATGGCG GCGCGAACGA AGCGGCGATG GAACTGATCC AAGACATGAA AGATGAAGCC
GATGCGCGCG ACATCTTAAT GGGTAAACTG GAGCGTAAAG ATAAGATCAT GGGCTTCGGC
CATGCGATTT ACCGCGATAG CGATCCACGT AATGCCATCA TCAAAGAATG GTCAGAAAAA
CTGGCTGCCG CCAACGGTGA CGACCGTCTA TACCGCGTAT CGGTTGCCTG TGAAGCCCTG
ATGTGGGAAC AGAAAAAACT CTTCTGTAAT GCAGATTTTT TCCACGCCAG CGCATACCAC
TACATGGATA TTCCGACTAA GTTGTTCACG CCAATCTTCG TGTGTTCACG GGTAACGGGC
TGGGCGGCGC ACGTGATGGA GCAACGCTCT AACAACCGCA TCATCCGCCC AAGTGCCGAT
TATGTGGGCG TGGCCCCACG CAAAGTCGTC CCCATTGCCA ACCGTTAA
|
|---|
| Protein sequence | MSEAKKLSGA GLRGQSAGET ALSTVGVSGS GLTYRGYDVK DLGENATFEE VAYLILYGEL
PTQAQLDAYK TKLKGLRGLP QALKEVLERI PAETHPMDVM RTGCSMLGNL EAEHSFADQS
EITDRLLAAF PSIICYWYRF SHDGVRIDTE TDDDQIGAHF LHLLHGKAPS ALHAKVMDVS
LILYAEHEFN ASTFTARVCA STLSDMHSCV TGAIGSLRGP LHGGANEAAM ELIQDMKDEA
DARDILMGKL ERKDKIMGFG HAIYRDSDPR NAIIKEWSEK LAAANGDDRL YRVSVACEAL
MWEQKKLFCN ADFFHASAYH YMDIPTKLFT PIFVCSRVTG WAAHVMEQRS NNRIIRPSAD
YVGVAPRKVV PIANR
|
|---|
| |