| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4021 |
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| Symbol | prpB |
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| ID | 5371379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4800064 |
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| End bp | 4800942 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832286 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_001368204 |
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| Protein GI | 153002523 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCAAA GCGCAGGATT ACGTTTTCGC CAAGCTCTTG CTAAGGCTAA ACCGTTACAA
ATCGTTGGCA CCACCAATGC CTATTTTGCC TTGATGGCAG AGCAAACTGG CTTCCAAGCC
TTGTATCTTT CGGGCGCTGG CGTTGCCAAT GCTTCCTACG GTTTGCCTGA CTTAGGTATG
ACCTCAATGA ACGACGTGTT AATCGATGCA GGTCGTATCA CCTCAGCCAC ACAAGTGCCT
TTACTGGTCG ATATCGATAC TGGCTGGGGC GGCGCATTCA ACATTGCTCG CACCATCAAA
GAGTTTGAGA AAGTTGGCGT CGCCGCTGTG CACATGGAAG ACCAAGTGTC GCAAAAGCGT
TGCGGCCACA GACCTAACAA AGCAGTCGTG AGCATTGAAG AAATGGTCGA TCGCATTAAA
GCGGCCGTCG ATGCCCGTAC CGATCCTAAC TTTGTGATCA TGGCGCGTAC CGATGCGGTT
GCCGTTGAAG GCTTAGAAGC AGGTATCGAA CGTGCTCAAG CCTATATCGC CGCCGGTGCC
GATATGATCT TCGCCGAAGC CTTAACTGAG CTAGACCAAT ATCGCCACTT TAAAGCGCAA
GTCAAAGCAC CGATTTTGGC CAACATGACT GAATTTGGTC AAACCCAATT GTTCAATAAA
GAAGAACTCG CGCAGGCGGG CGCCGACATG GTGCTTTATC CACTCGGTAC TTTCCGTGCA
GCCAACCAAG CGGCACTGAA CGTCATGCAA GCGCTGATGA ATGATGGTCA TCAACGCAAC
GTGCTCGACA CTATGCAGAC CCGTAAAGAC TTGTATAAGT ACTTGGGCTA CCACGCCTTT
GAAGACAAGT TAGATCAACT GTTTAGCCAA GATAAATAG
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| Protein sequence | MTQSAGLRFR QALAKAKPLQ IVGTTNAYFA LMAEQTGFQA LYLSGAGVAN ASYGLPDLGM
TSMNDVLIDA GRITSATQVP LLVDIDTGWG GAFNIARTIK EFEKVGVAAV HMEDQVSQKR
CGHRPNKAVV SIEEMVDRIK AAVDARTDPN FVIMARTDAV AVEGLEAGIE RAQAYIAAGA
DMIFAEALTE LDQYRHFKAQ VKAPILANMT EFGQTQLFNK EELAQAGADM VLYPLGTFRA
ANQAALNVMQ ALMNDGHQRN VLDTMQTRKD LYKYLGYHAF EDKLDQLFSQ DK
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