Gene Shew185_4007 details

Gene Information

• Locus tag: Shew185_4007
• ID: 5371161
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 4782157
• End bp: 4784031
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640832273
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_001368191
• Protein GI: 153002510
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAGT TACGATCAGC TACCAGTACC GAAGGCCGCA ATATGGCGGG TGCACGTGCG 
TTATGGCGCG CCACAGGGGT GAAAGACAAT GATTTTGGTA AGCCAATTAT CGCCATTGCT 
AACTCCTTTA CTCAATTTGT ACCGGGCCAC GTGCACTTAA AAGACATGGG CTCACTCGTC 
GCGAGCGCCA TTGAAGAAGC GGGCGGTATC GCAAAAGAAT TCAATACGAT TGCCGTCGAT 
GACGGTATCG CCATGGGCCA CGGCGGCATG CTCTATAGTC TGCCATCGCG TGAGCTTATC 
GCCGACAGTG TGGAATACAT GGTTAACGCC CACTGCGCCG ATGCCTTAGT GTGTATCTCC 
AACTGCGACA AGATCACCCC CGGCATGTTG ATGGCGGCGC TGCGCCTCAA TATTCCCGTC 
GTGTTTGTCT CTGGTGGACC GATGGAAGCA GGCAAAACTA AGCTGTCGGA TAAGCTCATC 
AAACTCGATT TAGTCGATGC TATGGTGGCG GGCGCCGACT CGAATGTGAG CGATGAAGAC 
AGTGCCAAAA TTGAGCGTAG CGCGTGTCCA ACCTGTGGCT CTTGCTCAGG CATGTTTACC 
GCCAACTCAA TGAATTGTTT AACCGAAGCT CTAGGATTAT CGCTGCCGGG TAACGGCTCT 
ATGCTGGCAA CCCACGCCGA CCGCCGCGAG CTGTTTTTAG AAGCGGGTCG CCGCGTGATG 
GCGCTGGCAA AACGTTATTA TCATCAAGAT GATGAATCGG CATTGCCACG TAATATCGCC 
AACTTCAAAG CCTTCGAAAA TGCCATGACT TTAGATATCG CCATGGGCGG TTCATCTAAC 
ACTGTATTGC ATTTATTGGC CGCCGCGCAG GAAGCCGATG TTGATTTTAC CATGGCGGAT 
ATCGACCGTA TGTCGCGCCT TGTGCCGCAC CTTTGTAAGG TTGCGCCATC GACGCCTAAA 
TACCATATGG AAGATGTGCA CCGCGCCGGC GGCGTGATGG GGATTTTGGG CGAGCTCGAC 
AGAGCTGGAT TACTGCATAC CGATGTGTTC CATGTGGCGG CCGATAATGA CGGCACGCCG 
GGCAGCGGGA CCTTGAAATC GGTATTGGCC CAGTACGATG TGATGCAGAC GCAAGATGAA 
AAAGTAAAAC ACTTCTTTAT GGCGGGACCT GCGGGCATTC CGACCACTAA AGCCTTTAGC 
CAAGATTGTC GCTGGCCGTC ACTGGATAAC GACAGACAAG AAGGTTGTAT CCGTAGCCGC 
GAGTTTGCTT TCAGCCAAGA GGGCGGTCTT GCCGTATTGT CGGGCAACGT GGCCGAGAAC 
GGTTGTATCG TTAAAACGGC GGGCGTGGAT GAATCGAATC TGACCTTTAT TGGCTCGGCG 
CGCGTCTATG AAAGCCAAGA TGACGCCGTG GCGGGTATCT TAGGCGGCGA AGTGGTGGCG 
GGTGATGTGG TTGTTATCCG TTATGAAGGC CCGAAAGGCG GCCCGGGTAT GCAAGAAATG 
TTGTACCCAA CCAGTTACTT AAAATCACGC GGCTTAGGTA AAGCCTGTGC GCTGATCACC 
GACGGTCGTT TCTCCGGTGG CACTTCAGGC TTATCGATTG GCCACGTTTC ACCCGAAGCG 
GCAGCGGGCG GCACAATCGC CTTGATTGAA AATGGCGATC GCATCGAAAT TGATATTCCA 
AAGCGCAGCA TCAAGCTGGC AGTAAGCGAT GTTGAACTCA ATGCTCGCCG CGAAAAAATG 
CACAGTCTTG GCCCAATGGC GTGGAAACCT ATCGGTCGCC AACGTTATGT ATCACTCGCG 
CTTAAGGCCT ACGCCATGCT TGCCACCAGT GCCGACAAGG GCGCGGTGCG CGATCGCAGT 
AAACTGGAGG ACTAA 

 

Protein sequence

MPKLRSATST EGRNMAGARA LWRATGVKDN DFGKPIIAIA NSFTQFVPGH VHLKDMGSLV 
ASAIEEAGGI AKEFNTIAVD DGIAMGHGGM LYSLPSRELI ADSVEYMVNA HCADALVCIS 
NCDKITPGML MAALRLNIPV VFVSGGPMEA GKTKLSDKLI KLDLVDAMVA GADSNVSDED 
SAKIERSACP TCGSCSGMFT ANSMNCLTEA LGLSLPGNGS MLATHADRRE LFLEAGRRVM 
ALAKRYYHQD DESALPRNIA NFKAFENAMT LDIAMGGSSN TVLHLLAAAQ EADVDFTMAD 
IDRMSRLVPH LCKVAPSTPK YHMEDVHRAG GVMGILGELD RAGLLHTDVF HVAADNDGTP 
GSGTLKSVLA QYDVMQTQDE KVKHFFMAGP AGIPTTKAFS QDCRWPSLDN DRQEGCIRSR 
EFAFSQEGGL AVLSGNVAEN GCIVKTAGVD ESNLTFIGSA RVYESQDDAV AGILGGEVVA 
GDVVVIRYEG PKGGPGMQEM LYPTSYLKSR GLGKACALIT DGRFSGGTSG LSIGHVSPEA 
AAGGTIALIE NGDRIEIDIP KRSIKLAVSD VELNARREKM HSLGPMAWKP IGRQRYVSLA 
LKAYAMLATS ADKGAVRDRS KLED