| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3990 |
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| Symbol | |
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| ID | 5369683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4765114 |
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| End bp | 4767126 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640832256 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_001368174 |
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| Protein GI | 153002493 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA ATCCCGCCCA AAACGATGCT GTTCATTATG TTTCAGGCCC TTGCCTAGTA
TTGGCGGGTG CGGGCAGTGG TAAGACGCGC GTAATTATCA ATAAAATCGG TTACTTGGTC
GAAAAGTGCG GCTATAAGGC GCGCAATATT GCGGCGGTGA CCTTCACCAA CAAGGCTGCC
CGTGAGATGA AAGAGCGGGT CGCTCAGTCC ATGGGACGCA AAGAGGCCAG AGGCCTGTGG
ATTTCAACCT TCCACACCTT AGGGCTTGAA ATCATTAAGC GTGAGCATAA GGTCTTAGGC
TTAAAGCCGG GATTTTCGTT GTTTGATGAT CAAGATACCT TGGCACTGCT CAAAGAGTTA
ACCCAAGACG AATTAGATGA AGATAAAGAT TTACTCAAAG CGCTCGCCAG TACGATTTCA
AACTGGAAGG GCGGTTTAGT TATTCCCGAG CATGCGCGCA AAATCGCTAA AGATGAGCAG
CAGCATTTAT TTGCCATGTT GTATCAGCGT TATGCCCAGC ACATGAAAGC CTATAACGCC
TTAGATTTTG ACGATTTAAT CCTGATGCCA ACCTTATTGT TGCGGCATCA TGAAGAAGTG
CGTACCCGCT GGCAAACCAA GATCCAATAC TTGCTGGTGG ATGAATATCA AGATACCAAT
ACCAGCCAAT ATGAAATGGT AAAGCTGTTA GTGGGTGAGC GGGCGCGCTT TACCGTAGTG
GGTGACGACG ATCAGTCCAT CTATTCATGG CGCGGCGCTA AACCACAAAA CTTAGTGTTA
TTGGGTAAGG ATTTTCCGCA GCTTAAGTTA ATTAAGCTCG AGCAGAATTA CCGTTCTAGT
CAACGGATCC TGCGGGCTGC TAACATTCTT ATCGCGAACA ATCCCCATGT TTACGATAAA
GCGCTCTTTA GTGAGCTTGC CTATGGGGAG CCGCTGCGGG TGCTATTTGC CGCCAACGAG
GAGCAAGAGG CTGAACGTGT GGTCGCGGAA ATAGTGCGAC ACAAGTTTGT TGGCCGTACT
CAGTTTGGCG ACTATGCGAT TCTGTATCGC GGCAACCATC AATCGCGGTT ACTCGAGCGC
GCGCTGATGA CGAACCGCAT TCCTTACAAA TTGAGTGGTG GCACGTCATT CTTCGCCCGT
GCTGAAATCA AAGACATCAT GGGCTATCTA AAGCTGGTGG TGAATCCCGA TGATGATAAT
GCTTTCCTGC GCATAGTTAA CTTGCCTAAA CGTGGCATAG GCCCATCGAC TTTAGAGCGC
TTAGGTAATT TCGCTAATGA GAAGCATATT TCTATGTTTG CGGCGATTTT TGAGCCTGAA
CTCAATCATC ATTTACCGCC GGCGGCTATG TCATCCCTGT ATCAATTCGG TCGTTTCATT
GTCGAGACAG GGGATCATGC AGAGCGTGGT GAACCTGTCG AGGCTGTGAA GCATTTGATC
CGTAAGATCA ATTATGAAGA TTATCTATAC GAAACCAGCA CGAGTGCCAA AGCCGCTGAA
ATGCGGATGA AGAATATCTC AGAGCTATAC CGTTGGGTAA CTGAGATGCT CGCGGGTGAT
GAATTAGATG AGCCAATGAC CTTGCCTGAG GTTGTGACTC GACTGACGCT CAGAGACATG
ATGGAGCGCA ATAGCGAGGA CGAAGGCGGC GATCAAGTGC AGTTGATGAC CTTGCATGCT
TCTAAGGGCT TAGAGTTCCC GTTTGTGTTT ATGGTGGGAG TGGAGGAGCG GATCTTACCC
CATCAGACCA GTATAGATGA AGACAATGTC GATGAAGAGC GCCGCTTAGC CTACGTGGGC
ATCACTCGGG CTCAACGTGA ACTGTGGTTT ACCCTCTGTC GTGAAAGACG TCAATTTGGT
GAAACCATGC GTTGTGAGCC GAGCCGTTTC TTGCTTGAGT TACCTCAAGA TGATGTGGTA
TGGGAAAATC GTAAACCACA GCAGACAGAA CAGGAGCGGA TGCAGACTGG GCGAGCCAAC
ATTTCTAGCT TAAGGGATAT GTTTAAAAAA TAA
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| Protein sequence | MKLNPAQNDA VHYVSGPCLV LAGAGSGKTR VIINKIGYLV EKCGYKARNI AAVTFTNKAA
REMKERVAQS MGRKEARGLW ISTFHTLGLE IIKREHKVLG LKPGFSLFDD QDTLALLKEL
TQDELDEDKD LLKALASTIS NWKGGLVIPE HARKIAKDEQ QHLFAMLYQR YAQHMKAYNA
LDFDDLILMP TLLLRHHEEV RTRWQTKIQY LLVDEYQDTN TSQYEMVKLL VGERARFTVV
GDDDQSIYSW RGAKPQNLVL LGKDFPQLKL IKLEQNYRSS QRILRAANIL IANNPHVYDK
ALFSELAYGE PLRVLFAANE EQEAERVVAE IVRHKFVGRT QFGDYAILYR GNHQSRLLER
ALMTNRIPYK LSGGTSFFAR AEIKDIMGYL KLVVNPDDDN AFLRIVNLPK RGIGPSTLER
LGNFANEKHI SMFAAIFEPE LNHHLPPAAM SSLYQFGRFI VETGDHAERG EPVEAVKHLI
RKINYEDYLY ETSTSAKAAE MRMKNISELY RWVTEMLAGD ELDEPMTLPE VVTRLTLRDM
MERNSEDEGG DQVQLMTLHA SKGLEFPFVF MVGVEERILP HQTSIDEDNV DEERRLAYVG
ITRAQRELWF TLCRERRQFG ETMRCEPSRF LLELPQDDVV WENRKPQQTE QERMQTGRAN
ISSLRDMFKK
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