Gene Shew185_3987 details

Gene Information

• Locus tag: Shew185_3987
• ID: 5372230
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 4758467
• End bp: 4759174
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640832249
• Product: hypothetical protein
• Protein accession: YP_001368171
• Protein GI: 153002490
• COG category: [S] Function unknown
• COG ID: [COG3672] Predicted periplasmic protein

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGGCA GACTTGGTTA TAAACATTCA TTATTGCGAG TCTGCCGCTT TAGCCTCATA 
GCGTCAGCCT TAGGCATATG CTGCCTATAT GCTGCCCCCA CACAAAACCT TGATGAAGGG 
AAGATCACTT CAACCCTTGA AAAACATTAT GGTGAGCGTG CAGGGATGCG AGCTAGGGCT 
TGGTTCAAAG TGTTATCGGA AGCAAGTACG CTAGATGAAA AAGAAAAGCT ATTGAAAGTA 
AATAACTTTT TCAACTTATT CCGCTTTATT GATGACAGTA AATTATGGGG TGAGTCAAAT 
TATTGGGCAA CGCCGATGGA GTTTATTGGC GTGAATGGTG GTGACTGCGA AGATTTTTCG 
ATCGCTAAAT ACTTCACCTT GCTCCAACTT GGCGTGCAAG AGGACAAGAT GCGGATCACT 
ATGGTTAAAG CGACTACGGT GAATCAATAC CACATGGTAT TGGCTTACTA TGAGACACCA 
GCATCGATCC CCTTAGTTCT CGATAATCTT GATCATGAAA TAAAGCCCGC CACCAAAAGA 
AAAGATCTAC TACCTGTTTA TAGCTTTAAC GGTAAACAGT TATGGCTCAA TAAAGAGCAA 
GGTCGAGGTG TACTAGCGGG TTCGTCAACA CGGCTAGAAA AATGGAACGA TCTTAACCAT 
AGATTAGGTG TTGACCGCCT TAGACAACCA AAATTAAAAC TGGAGTAG 

 

Protein sequence

MNGRLGYKHS LLRVCRFSLI ASALGICCLY AAPTQNLDEG KITSTLEKHY GERAGMRARA 
WFKVLSEAST LDEKEKLLKV NNFFNLFRFI DDSKLWGESN YWATPMEFIG VNGGDCEDFS 
IAKYFTLLQL GVQEDKMRIT MVKATTVNQY HMVLAYYETP ASIPLVLDNL DHEIKPATKR 
KDLLPVYSFN GKQLWLNKEQ GRGVLAGSST RLEKWNDLNH RLGVDRLRQP KLKLE