Gene Shew185_3981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3981 
Symbol 
ID5371269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4731130 
End bp4732296 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content48% 
IMG OID640832243 
ProductHemY domain-containing protein 
Protein accessionYP_001368165 
Protein GI153002484 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3071] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID[TIGR00540] hemY protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAAA TATTAATTTT CTTAGGGATT GTGCTAATAG GGCTCTGTAT CAGCCCTTGG 
TTGGTTGGTA ATACAGGTTA TGTCTATATC GCTGCGGGTG ACTACCAGAT TGAGACCAGC
TTAGTCTTTG GGATCATTGC GTTAATTGTA TTTTATGCCG TATTCCAAGT ACTCGAATGG
CTAGTGATTA GCGCCATCAA CCTGATGCTG CGCAGTCGTT TTATTCCCCA TCACTGGCGC
CGTCGCTCGG CTAAAAAACA TACCTTAATG GGTGCACTGG CTCTGGCTGA AGAAGATTGG
CCAGCAGCAG AACGCGCCAT GATAAAAGGC GCTGACAACG GTGAGCTCCC AGCACTTAAT
TTACTTGCAG CGGCCCGTGC AGCTCAGTAT CAACAAAAAA TAGCCGAGCG AGATCAATAT
CTTGATCGCG CTGCAGCGCA ACCTCTTGCC GCGAATGCCG TCGCAACCAC TCGCACTCGA
TACCTTTTAA AGCAAGGGGA ATTAGCCCTA GCCCGCACCG AGCTGGATAA ATTAGCACCG
ACGAGCAAGA GTAAAGCGCC AGTACTCAAA CTCGCCCTTG AGTTATACCG AACCCAAGAG
GATTGGGATG CGCTCAAGCT GTTAATACCT ATTTTGAAGA AGCGTCAGAT CCTCGATGAT
GCTCAGCTGA ATGAGCTCAA TATCGCCACT AATTGCGCGT TACTCAAAGC CGCAGCCATC
AAAGGTGAAG AAGCCTTAGA GCAATGCTGG CAGTGGTTAT CCCGCAGTGA ACGCAATCAG
TCTGAGTTTC TGGCGATTTA TGCCATGGGT TTATGCCGCT TTAATCGCAA AGACCAAGCG
CTGAAACTAA TCGCGAAAAA GTTACGAACC GCTCCCGAGT CAGCACTTTT ACATGCAATT
CCTGAAATCG CGACAGCCCA AGACACAGAG ATCCGTAAAC AGTTACTCAA GCATGAAGTC
ACCCATGAGA ATAATGCGGA CTACCAGATG TGTTTAGCTA AGCTGTATCA GCAAACGCGG
GATATGAAAG AAGCCAGAAG CTGCTTGCAG AATGTTTGCC GACTCGAACC AACAAAAGCC
TCATGGCTGG CGCTCGCTCG CATTCAAGAA CAGTTAGGCG AACAAGCTAA CGCCAATCAA
AGCTACCGTC AGGCAGTTAA CCTGTAG
 
Protein sequence
MIKILIFLGI VLIGLCISPW LVGNTGYVYI AAGDYQIETS LVFGIIALIV FYAVFQVLEW 
LVISAINLML RSRFIPHHWR RRSAKKHTLM GALALAEEDW PAAERAMIKG ADNGELPALN
LLAAARAAQY QQKIAERDQY LDRAAAQPLA ANAVATTRTR YLLKQGELAL ARTELDKLAP
TSKSKAPVLK LALELYRTQE DWDALKLLIP ILKKRQILDD AQLNELNIAT NCALLKAAAI
KGEEALEQCW QWLSRSERNQ SEFLAIYAMG LCRFNRKDQA LKLIAKKLRT APESALLHAI
PEIATAQDTE IRKQLLKHEV THENNADYQM CLAKLYQQTR DMKEARSCLQ NVCRLEPTKA
SWLALARIQE QLGEQANANQ SYRQAVNL