| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3978 |
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| Symbol | hemC |
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| ID | 5372202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4728214 |
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| End bp | 4729146 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832240 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001368162 |
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| Protein GI | 153002481 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAGA ACCGCATACG TATCGCAACC CGCAAGAGTC CGCTGGCCAT GTGGCAAGCT
GAATTTGTTA AAGCCGAATT AGAACGCATT CACCCAGGTA TTGTGGTGGA ATTGCTGCCA
ATGAGCACTA AAGGCGACGT TATCTTAGAT ACGCCGCTAG CCAAAGTGGG CGGTAAAGGT
TTGTTCGTCA AAGAGCTTGA AGTCGCTATG TTAGACGATC TTGCCGATAT CGCAGTGCAC
TCAATGAAAG ACGTGCCAGT CGACTTCCCT GAAGGCTTAG GCCTTGAAGT GATTTGCGAG
CGCGAAGATC CCCGCGATGC CTTTGTATCG AATTTATATA AATCGATCAG CGAATTACCA
TTAGGCGCAA CTGTGGGCAC CTCGAGCCTA CGTCGTCAAT GTCAGATACG TGCATCACGT
CCCGACCTCA TCATCAAAGA TTTACGCGGT AACGTTGGAA CTCGTTTAGC TAAGCTTGAT
AACGGCGAAT ACGATGCCAT TATTCTTGCC GCTGCTGGCT TAATCCGTCT GAAATTGTCT
GAGCGTATTG CCAGCTTTAT TTCTGCAGAA GAATCCTTAC CCGCCAACGG CCAAGGCGCT
GTGGGTATCG AATGTCGCAT CAACGACGAA CGTGTTAAAG CGCTACTGGC GCCATTAGAG
CATTTAGAAA CTCGCTACCG TGTTCTTGCC GAGCGCGCGA TGAACACTCG CCTTGAAGGT
GGATGCCAAG TGCCGATTGG CGCATTTGCT GAAATCGATG GTGACGAGAT GACGCTACGC
GGCCTAGTCG GTAACCCAGA TGGCAGTGAA ATCATCGAAG GCGTGATCAC AGGTCCAAAA
ACCGAAGCCA CGCAATTAGG GGTTGCCCTT GCTGAAGAGT TACTCAGCAA AGGTGCCAAA
ACCATTCTCG ACGCCGTTTA CGCTAAAGCC TAA
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| Protein sequence | MSENRIRIAT RKSPLAMWQA EFVKAELERI HPGIVVELLP MSTKGDVILD TPLAKVGGKG
LFVKELEVAM LDDLADIAVH SMKDVPVDFP EGLGLEVICE REDPRDAFVS NLYKSISELP
LGATVGTSSL RRQCQIRASR PDLIIKDLRG NVGTRLAKLD NGEYDAIILA AAGLIRLKLS
ERIASFISAE ESLPANGQGA VGIECRINDE RVKALLAPLE HLETRYRVLA ERAMNTRLEG
GCQVPIGAFA EIDGDEMTLR GLVGNPDGSE IIEGVITGPK TEATQLGVAL AEELLSKGAK
TILDAVYAKA
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