Gene Shew185_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3976 
Symbol 
ID5370973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4725186 
End bp4725515 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content43% 
IMG OID640832238 
Productfrataxin family protein 
Protein accessionYP_001368160 
Protein GI153002479 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1965] Protein implicated in iron transport, frataxin homolog 
TIGRFAM ID[TIGR03421] iron donor protein CyaY 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATTA CAGATACAGA ATTTCACCAG CTCGCCGATG ACATGTTCCA AGCCATAGAA 
AATGCGATTG AAACTGCGAT TGATGAGCAA GATGCCGATG TTGATATCGA TGCCAGTGGC
AACGTATTGC AATTAGAATT TGTTGATGGC TCTAAGATAG TGATCAACAA GCAAGAACCT
TTGCATGAGA TTTGGGTAGC CACACGTTTT GGTGGATATC ATTTTGGTTT TGTTGAAGGT
AAATGGATGG ACGGACGTAA TGGCGGCGAG TTTATGCCAT TCGTGCAAGA GTCTATCGAG
CGCCAAGGCG GAATTAAGCT TAGCTTTTAA
 
Protein sequence
MAITDTEFHQ LADDMFQAIE NAIETAIDEQ DADVDIDASG NVLQLEFVDG SKIVINKQEP 
LHEIWVATRF GGYHFGFVEG KWMDGRNGGE FMPFVQESIE RQGGIKLSF