Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3971 |
Symbol | |
ID | 5371360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4721100 |
End bp | 4722020 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640832233 |
Product | tyrosine recombinase XerC |
Protein accession | YP_001368155 |
Protein GI | 153002474 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTACGC AAACAGCCGA AGTGTCGGCG CTTAATACTC AATGGTTACA AACCTTTGAA CGCTATCTGA GTACCGAGCG GCAGTTGTCG GCCCATACAG TACGTAATTA CCTTTACGAG CTTAATCGCG GAAGCGATCT CTTGCCTGAC GGCGTGCATC TACTCAATGT GAGCCGCGAG CATTGGCAGC AAGTATTGTC TAAATTGCAC CGCAAAGGCT TAAGCCCGCG ATCGCTTTCT TTGTGTTTAT CTGCGGTAAA ACAATGGGGT GAATTTTTGC TGCGCGAAGG TGTGATCGAG CTTAATCCTG CCAAAGGCTT AAGTGCTCCC AAACAAGCCA AACCGCTGCC GAAGAATATC GATGTCGATG CCATCAGTCA TTTGCTGGAC ATTGAAGGCA CGGATCCCCT AAGCCTGCGG GATAAAGCCA TGATGGAATT GTTTTATTCC AGTGGTTTAC GTTTAGCAGA ACTCGCCGCG CTTAATTTAT CCAGTGTGCA ATACGATTTG AAAGAAGTGC GAGTCTTAGG TAAAGGCAAT AAGGAACGTA TCGTCCCCGT CGGTCGTTTG GCGATTGCTG CGCTGCAGAA TTGGCTTAAT TGCCGAAAGC AGATCCCCTG TGAAGATAAC GCCTTATTTG TGACCGAAAA GGGCAAGCGA CTCTCCCATC GTAGTATTCA GGCGCGTATG GCGAAATGGG GGCAAGAACA GGCATTATCG GTGCGCGTAC ATCCACATAA ACTGCGCCAC TCCTTTGCCA CTCACATGTT AGAAGCGAGC GCCGATCTGC GGGCGGTGCA AGAATTATTG GGCCATGCGA ACCTAGCGAC CACGCAAATT TATACCAGTT TGGATTTCCA ACACTTAGCT AAGGTGTATG ATAACGCCCA TCCTAGAGCG AAAAAAACAC AGGATAAATA A
|
Protein sequence | MSTQTAEVSA LNTQWLQTFE RYLSTERQLS AHTVRNYLYE LNRGSDLLPD GVHLLNVSRE HWQQVLSKLH RKGLSPRSLS LCLSAVKQWG EFLLREGVIE LNPAKGLSAP KQAKPLPKNI DVDAISHLLD IEGTDPLSLR DKAMMELFYS SGLRLAELAA LNLSSVQYDL KEVRVLGKGN KERIVPVGRL AIAALQNWLN CRKQIPCEDN ALFVTEKGKR LSHRSIQARM AKWGQEQALS VRVHPHKLRH SFATHMLEAS ADLRAVQELL GHANLATTQI YTSLDFQHLA KVYDNAHPRA KKTQDK
|
| |