| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3970 |
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| Symbol | |
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| ID | 5371359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4720369 |
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| End bp | 4721100 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640832232 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001368154 |
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| Protein GI | 153002473 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTGCT ATCTTAGACC TCAAAATATT CAAGCGATCA GTTTCGATCT CGACGATACC
CTGTACGATA ATCTACCGCA TATTTTAAAT GCCGAAGCTG AGCTGGCGAC GTTTCTGTTG
CAGACTTATC CATTATCGCA GGCGTGGCAA ACCCATGATT GGCGCAGGCT AAAACTGCAA
CTGCTGCAGC AAAATCGCGA GCTAGCCCAC GACACCAGCG CTGCCCGTTT GGCAACGCTT
CGCCAAGGGC TAATACAGCT TGGGTATTCG GCCGTTGAAG CCGAACGCGG CGCCGAGCAA
GGATTGGCGT GTTTTTATTT TCATCGCAGC CATTTTCAAG TATCTGACGA AGTGCTCTTG
TTACTCAAAC GCTTATCGCA GCATTTTAGA TTAATCGGCA TCACCAATGG CAATGTGGAT
GCCGAGCGAA TTGGTTTAGG CGATACCTTC GAGTTTGTGT TGCATCCAGG CAATGGTGTG
CATATGAAAC CCGCCAAAGA CATGTTCGAA TTGGCCTGCT CGCGATTAAA TATTTCACCG
CAGCATTTAC TGCATGTTGG CGACAGTATG AATGCTGATG TGCGCGGTGC GCGGTTGGCT
GGGTGCCAGT CTGTGTGGTT GAATCCGAGT TTTGGCCGAG TCGATTCCTT ACCTATTGCG
GCCTTGTTAC CCCATTTAGA AATTAATGCT CTCGATGCGT TAATCAAAGT GCTGGCTATC
GACGCAAACT AA
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| Protein sequence | MRCYLRPQNI QAISFDLDDT LYDNLPHILN AEAELATFLL QTYPLSQAWQ THDWRRLKLQ
LLQQNRELAH DTSAARLATL RQGLIQLGYS AVEAERGAEQ GLACFYFHRS HFQVSDEVLL
LLKRLSQHFR LIGITNGNVD AERIGLGDTF EFVLHPGNGV HMKPAKDMFE LACSRLNISP
QHLLHVGDSM NADVRGARLA GCQSVWLNPS FGRVDSLPIA ALLPHLEINA LDALIKVLAI
DAN
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