| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3959 |
|---|
| Symbol | frdB |
|---|
| ID | 5370214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 4707488 |
|---|
| End bp | 4708219 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640832221 |
|---|
| Product | fumarate reductase iron-sulfur subunit |
|---|
| Protein accession | YP_001368143 |
|---|
| Protein GI | 153002462 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAG GTCGTCAGTT AACCTTTAAT ATCTTTCGTT ATGATCCGCA GGAGCCAAAC
GATAAGCCGA AAATGGTGCG ATATCAGCTC ACTGAAACGC CGGGTATGAC GGTCTTTATC
GCCCTCAATA AACTCAGGGA AGAACAAGAT ACCTCGATGC AGTTCGACTT TGTTTGTCGT
GCGGGCATTT GTGGCAGTTG CGCTATGGTG ATTAACGGTT TCCCGACGTT AGCGTGTCGT
ACCTTAACCG CCAAATACCC TAAGGGCGAA ATTACTCTAA TGCCGCTGCC AGGCTTTGAG
TTGATTGGCG ACCTATCAGT CAATACCGGT AAGTTTATGC GGGAATTGGC CGAACGCTTA
AAGCTGTGGT TACACCCTAA GGCCAATGGC ATCAGCGTGC ATCGCCTCGA AGATCCAATG
GACCCAGACG AAGCTGCGCG CCTGTATGAG CTTGAGCGCT GCGTTGAGTG CGGCGTGTGT
GTTTCAGCTT GCGCGACTAA ACAAATGCGT GAAACCTTTG TCGGCGCTGT GGGCATGATG
AAAATAGCTC GTTTTGAGAT GGATAGCCGT GACGCTCGTA CTGCCGAAGA TTTTTATCAT
GTAATTGGTA ATCAGGATGG GGTGTTTGGC TGCATGACCT TACTGGGTTG CCAAGACAAC
TGTCCTAAGG ATTTACCACA CATGCAGCAA ATCGCCTATT TACGCCGTAA GATGGCTATG
ACGCTGATTT GA
|
|---|
| Protein sequence | MSQGRQLTFN IFRYDPQEPN DKPKMVRYQL TETPGMTVFI ALNKLREEQD TSMQFDFVCR
AGICGSCAMV INGFPTLACR TLTAKYPKGE ITLMPLPGFE LIGDLSVNTG KFMRELAERL
KLWLHPKANG ISVHRLEDPM DPDEAARLYE LERCVECGVC VSACATKQMR ETFVGAVGMM
KIARFEMDSR DARTAEDFYH VIGNQDGVFG CMTLLGCQDN CPKDLPHMQQ IAYLRRKMAM
TLI
|
|---|
| |