Gene Shew185_3954 details

Gene Information

• Locus tag: Shew185_3954
• ID: 5371023
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 4699935
• End bp: 4703393
• Gene Length: 3459 bp
• Protein Length: 1152 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640832216
• Product: hypothetical protein
• Protein accession: YP_001368138
• Protein GI: 153002457

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAGT CCATGCTATG TCTGGCGATC ACCAGCGCAC TGACCCTTGT GGGGTGTGGT 
GCCGGTGATG AGCCTTATAA AGAACTCCCC AAAGATGAAA AGCAAGTCAC CACTGCCGAC 
ATCGATAAAG CCACTGAGCG GCAATATCTC TACATTCGCA GCGTGGGTAA GGCTCCGCGT 
TATGCCGCCG AGGTGCGAGG TTTTACCCAA GGTGATCCTA AGTTGGTAAC CTTGCATAAA 
ACAGAGAATG GTATCCAAGT ACGTCAAATT GACCGAGATA ATATCGGATT AGGCCATGAC 
AGCCGTTATC CTAATGAATA TAACCAAGCG CCAGTGTTAA CCATTCCTGG TGAATATATC 
GACTTTAAAT GTACCGAAGA TAAATGGCGT GAGTGTATTA ACGTAGAGCA AGTTAACACC 
GATGCTAATT TAACATGGCA GGATAAGCGC TACTTTGTCC CCGATTTTGC CAAAGCTAAA 
ATTGCCGAGT TGGGCATTAA TGACATATTT ACCTTTGGTG AATGTGTGAC TGAAACAGAG 
GCCCCGCGTC TAGTGAATAC TCAAGGCCAA AAAGGCTATG AGATGGATTT AGCTAAGGGC 
GTGGTTAACT TTGAAATTGA GCATACTTAT CAAGCTTCAC CAAGTTGCTT TAACCAATTT 
TACGGTGGCA ACCTCGACAA CCTATCCTTT ACGACCACTG AGTTTATTTC GATTGTGGCG 
GTGGATCAGT TAGCCAGTAA AGACTATCAA GCGATTCCCT ATGCCGAAAA TGAAAAGGGC 
GCATTTGGTT TCTTTACCTC TTCCCATACT TATCGTGATG CGACTGATTC AGAGGGCGTT 
GACGGGTATG TGCGTACCTA CATGAATCGC TTCAATCCGG CCAAATCGGA ACTGACTTAT 
TACTTGAGTA ATAATTTCTA CGATGCGAAA AATAAACCCT TTTTGGATGC TGCTATCGAG 
TCCGTGACGG CAATTAACAT TCAAAACAAG TTGTATAAAA CGGGTTTTCC ACAGATAAAA 
CTTGAGCAAG CCCACGATAA ACGCCATGGC GACCTGCGCT ATAGCAACAT CACTTTATTT 
GATGAACCGC TGGATAATGG TTTGGCGGGT TATGGCCCAT CCGCGGCAAA CCCGCTTACA 
GGCGAAATTG TGAGTGCGCG AGTCAATCAA TACAGCTCGA ATCTAAAACA AGGCGCAGTA 
CGTTACTATC GCCAAGTGCG TTTAGATTAT AACAGAGGCA AATTGGACGC GAATTCAGTG 
ACGTCGTTAA CGGGCGAGCC ATATGTTGCT CGTTTGGACA AGCCTGATGT CAGCCTAGAC 
ACCGCGCCAG TTGAGGCGGC TGCATTTGAG CAACCCACTC AGCAACTTAT CGCTGCACCC 
AAATCGATGT TATTAACGCC CAAGGATAAT AGTTTCGATG CTTTAGCGGA TTTTGATGAA 
AAAACACAAG CGTTTTGGTC TGAAAACTCA ATGATGCATG TGGATACCGT GTTTGCTACG 
GGTGGTAGTG ATCGTGAATT ACCTCGCGGC ATCAAAGGTC ATGAAATTGA CTGGAAAAAA 
GCTGAAATGT GGGTTGATGG CAAAGTGGGC GGTAAGTTAG CGGCATTTGA AGATCTGCCC 
ATAAGTTTAC AAGACTCCTT AACGACAGCC CTAGCCGCGC AAGCATTTGC TGGCACCTTA 
ACCCATGAGT TAGGACATAC CTTTGGCTTA AGGCATAACT TTGCTGGGAG TCGCGACCAC 
GACAATACCT TTAACCAAGC GCAACTGACG GAGTTAAAAG TCGCCTTTAG CGATGCGGGT 
TACCCAGAAA TTACCGTTAA TGCCGAGTTT TCCAGCCAAA TGGATTACAA CGTGAATCGG 
TTTGCGACCA CGTTTGAACC CTATGACTTA GCCGCGTTAC GTTTTGGTTA TGCCCGTGAA 
GTAGAAACGA AGGCCAACGA ATTTGTGTCG CTCAAAGCGG AAGATGTCAA ACGCCGTGAC 
GAACTCGCCA AAGGGGTTGT TAATGGAGAT ACTCGATTTG GTGTGCTCTA TAACATTGAG 
CAAAACAATA GCCTACGTCA GTATTCTTAC TGCACTGATG AACATGTGTC CCTTAACAGC 
AACTGTAATC GTGGTGATGC AGGTAAAAAC TTAGATGATA TTAATCAGTT CTATATCGAG 
AAGTATTTTG ATAGCTACGA GACCATGAAC TTACGCCATA ATCGTCAATC TTTATTTGAA 
GATCATAGCC TAAGTTACGC CATTAATCGT AAAGCTCAGT TTGATGAAAT ACGTCAATTC 
ATTGAAGATG TGAGCTTTTT AGAGCAATTA TTTGGTCTAT CTGAAAACTT TTTCGCTGGT 
GAATGCGAAC GATTGGCGGC GGCAGGTAGC GAGGCTTGGT ATTGCGCGAA TCAGCGGGCG 
ATGAATCAGT CGGCAGATTT CTTCCTTAAG CTGGTGGGAG AAAATGATGC GACCCTCGAT 
GTGACATACA AGCAAGCCGA TGGCAGCGTG GCCTTAAGAC AGCAGTACAA TTTTGGCAAA 
GTGCTTGAAC AATATCGTTT TAAAAGCGGC GATATGAAGG CGAAGTTTGA GCCAGGTGAG 
GTGATAAGTC AGTTCTCTGA TTCTCCTGAA GCCTTGAAAG AGCTGATCAT TAAATCGCAA 
ATTAATCCTA AATTTCAGGA TTTATTAACG GCGGATGTCA GCTTTTCGGG TCGCTTACTT 
AACGGTATTA AAACGCCTGC GTCCTCACCT AACCATCCCT ATGTGAATGA GCGCGACGTG 
TTGGGGGTGT GGCCAGATAA ATTGTTAGCC GTGAGAGCCT TAGTATCACG TACCACCCCA 
CGTAGTACAT CGAGTCTTGG TTATAAAGCA TTGGTTGATT TACCTAATGT GGGTCCAGTG 
TTCCAAGATA TGCTGTGTAA GATGACCATG GGTGAAGGTT CTGGGCTGAC TCGTGGTAAT 
GCACCCCTCT TTACCGAAAG CTGTGGCGTG AGTGGTAAGC TCGATAGCTA TTTGCCTTAT 
TACACTGATT TTGCGCAACA AAGTATTGAG CCATTACCTA ATTACGACCG TTCAGTTTCA 
CGTTACTTCC AATTCGATAC TGTTAACGGG CAGCCAAAAG GTAAGAGTAA TTTACTGCAG 
ATGATATTAC GCCAAGTGGT GCTTGCATCC GTTGACAGTG ATTATCAAGG CGAGCAAAAA 
GCTAGGGTAT GGCGTGAATA TGTTGGTATT CGTTTAGCTG GCCCAGCATT GGCTACTCAA 
GCAGAAGTGA CGGTAAATGG CCGAGTGTAC GCGGCAACCG CAGAAAACAC CTTAGCACTC 
GCGCTGATTA ACCGAATTAA AGAGATGGAA ACCTTTAAGA CGCAAGCCGG GGAGGCCACG 
CTTGCCATCA AGTTAAACAA TGGCACAGTA GGTGAGATCA TTGATAGCCA GTTAAGTCGA 
GATCAGTTAG TGCTCAGTTA CTTACCTGTG CTTGATTAA 

 

Protein sequence

MKKSMLCLAI TSALTLVGCG AGDEPYKELP KDEKQVTTAD IDKATERQYL YIRSVGKAPR 
YAAEVRGFTQ GDPKLVTLHK TENGIQVRQI DRDNIGLGHD SRYPNEYNQA PVLTIPGEYI 
DFKCTEDKWR ECINVEQVNT DANLTWQDKR YFVPDFAKAK IAELGINDIF TFGECVTETE 
APRLVNTQGQ KGYEMDLAKG VVNFEIEHTY QASPSCFNQF YGGNLDNLSF TTTEFISIVA 
VDQLASKDYQ AIPYAENEKG AFGFFTSSHT YRDATDSEGV DGYVRTYMNR FNPAKSELTY 
YLSNNFYDAK NKPFLDAAIE SVTAINIQNK LYKTGFPQIK LEQAHDKRHG DLRYSNITLF 
DEPLDNGLAG YGPSAANPLT GEIVSARVNQ YSSNLKQGAV RYYRQVRLDY NRGKLDANSV 
TSLTGEPYVA RLDKPDVSLD TAPVEAAAFE QPTQQLIAAP KSMLLTPKDN SFDALADFDE 
KTQAFWSENS MMHVDTVFAT GGSDRELPRG IKGHEIDWKK AEMWVDGKVG GKLAAFEDLP 
ISLQDSLTTA LAAQAFAGTL THELGHTFGL RHNFAGSRDH DNTFNQAQLT ELKVAFSDAG 
YPEITVNAEF SSQMDYNVNR FATTFEPYDL AALRFGYARE VETKANEFVS LKAEDVKRRD 
ELAKGVVNGD TRFGVLYNIE QNNSLRQYSY CTDEHVSLNS NCNRGDAGKN LDDINQFYIE 
KYFDSYETMN LRHNRQSLFE DHSLSYAINR KAQFDEIRQF IEDVSFLEQL FGLSENFFAG 
ECERLAAAGS EAWYCANQRA MNQSADFFLK LVGENDATLD VTYKQADGSV ALRQQYNFGK 
VLEQYRFKSG DMKAKFEPGE VISQFSDSPE ALKELIIKSQ INPKFQDLLT ADVSFSGRLL 
NGIKTPASSP NHPYVNERDV LGVWPDKLLA VRALVSRTTP RSTSSLGYKA LVDLPNVGPV 
FQDMLCKMTM GEGSGLTRGN APLFTESCGV SGKLDSYLPY YTDFAQQSIE PLPNYDRSVS 
RYFQFDTVNG QPKGKSNLLQ MILRQVVLAS VDSDYQGEQK ARVWREYVGI RLAGPALATQ 
AEVTVNGRVY AATAENTLAL ALINRIKEME TFKTQAGEAT LAIKLNNGTV GEIIDSQLSR 
DQLVLSYLPV LD