Gene Shew185_3950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3950 
Symbol 
ID5369605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4695638 
End bp4696564 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content49% 
IMG OID640832212 
ProductPpx/GppA phosphatase 
Protein accessionYP_001368134 
Protein GI153002453 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACAC CCGCTTATGC CGCTATAACA TTAGGCTCAA ACAGTTTTAA TATGCTGATC 
GCCAAAACGC GTGGTGGTCA GCCGCATATT ATTGCGAAAT ATAAACGTAA GGTGAGGCTT
GCCGAAGGCA TAGGCGACGA TGGCAACTTA AGCCATGACG TGATGCAGCG CGGCCTCGAC
TGTTTGAGTA TGTTTGCCCA AATGTTGGTG CAACATAAGA TTGAAGCACA TCATGTGGCT
GTGATTGCTA CCGCAACCCT TCGCAGCATC AGCAATGCCG ATGAGTTTAA TCGGCGTGCA
TTGCCGCTCT TAGGTCATCC AATTGAAATC ATCTCAGGCA TGCGTGAAGC TGAGCTTATC
TATCAAGGCA TGGTGGCGAC CACCTGTGGT CAAGGCCGTC GTTTAGTGAT AGATATCGGC
GGGGCGAGTA CTGAGTTTAT TATCGGTGAT GGGCATCAAG TGTTGTTCAA AACCAGTTTG
CCTTTCGGTA GCGTGACTTA TAATCGCCGA TTTTTTAGTA GCTTACCGCT GCAACAGTTA
GATTTCGATG ATGCCAAGCA GCAAGTGCTA ACCGCATTAG CTGAGCATAG ACAAACGCTA
CGCGATCTAG GCTGGCATTG TGTTGTTGGC GCATCTGGCG CGGTGCAATC TGTGGTTGAA
GTCCTGCTTC ACCGTGGCTT ATCTGAGACG ATAACGCTCG ATGTACTCAC TCAGTTGAAG
GCTGAAATTC TCGCCCAAGA AGATATTAGC TTAACGGGGA TTGCTGGGCT TTGTGGCGAG
CGTGCGCCGA CTTTTGCAGC GGGTGTCGCT ATTTTGTTGG CTTTGTTTGA GTTGCTGGGG
ATAGAGCATT TAGCCTTATC TGGCGGCGCA TTACGTGAAG GTGTTTTAGT AATGCTCGCG
CAGCGAATTA TTGACGAAGC GAGCTAA
 
Protein sequence
MPTPAYAAIT LGSNSFNMLI AKTRGGQPHI IAKYKRKVRL AEGIGDDGNL SHDVMQRGLD 
CLSMFAQMLV QHKIEAHHVA VIATATLRSI SNADEFNRRA LPLLGHPIEI ISGMREAELI
YQGMVATTCG QGRRLVIDIG GASTEFIIGD GHQVLFKTSL PFGSVTYNRR FFSSLPLQQL
DFDDAKQQVL TALAEHRQTL RDLGWHCVVG ASGAVQSVVE VLLHRGLSET ITLDVLTQLK
AEILAQEDIS LTGIAGLCGE RAPTFAAGVA ILLALFELLG IEHLALSGGA LREGVLVMLA
QRIIDEAS