Gene Shew185_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3946 
Symbol 
ID5369695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4693320 
End bp4694054 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content47% 
IMG OID640832208 
Producthypothetical protein 
Protein accessionYP_001368130 
Protein GI153002449 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT TAGTTTACGA ACAGCCCCTA AACGAGAAAA TTCGCAGCTA CTTGCGGCTC 
GAATACCTCG ATAAACAGCT GCAAAGTAAC CTAAATCATG ACCACCAACA TAGATGTTTT
TATCCGCTGT TTTCCCTCTG TGAATTGTCC GAACGCTGTG ATTATCGTAA TGAAGTATTA
AAAGACATTG AACGGCACTT GCTGCAACTC AGCAAATGGC AAGAATTAGA TCACGTCGAC
CACCAGCAAA TCGATCTTTA TATCAACGCC CTCACCCAAG CCCGCGAACC GTTGCAAAAG
CCAGAACGCT TCGGCAGCCA ACTAAAACAA GACAGATTTA TTTCTGCGCT ACGACAACGC
TTTGGCATGC CGGGCGCCTG CTGTAACTTC GATCTGCCGC AACTGCATTA TTGGCTAGCT
AAACCTTGGG AAGAAAAACA ACAAGACTAC CGCTCTTGGA TAGCGCATTT CGAACCTTTA
CTCACCCCCA TCACCCTATT GCTCCAACTC ACCCGCAGCA CAGCCCATTA CGACAATGCC
GTTGCCCATG CAGGTTTTTA TCAGGGTGAC AGTGCTCAAG CACTTGCTTT GGTGCGAGTC
AAAGTCGATG CCTCCCACGG GTGTTATCCT ACGATTAGCG GCCATAAAAA CCGTTTTGCC
ATCCATTTTG TGCAGTTTGA ACAACAACGC CACTCCGACC GTTCGATTGA TTTCTTACTG
GCTACCTGTG CATGA
 
Protein sequence
MTELVYEQPL NEKIRSYLRL EYLDKQLQSN LNHDHQHRCF YPLFSLCELS ERCDYRNEVL 
KDIERHLLQL SKWQELDHVD HQQIDLYINA LTQAREPLQK PERFGSQLKQ DRFISALRQR
FGMPGACCNF DLPQLHYWLA KPWEEKQQDY RSWIAHFEPL LTPITLLLQL TRSTAHYDNA
VAHAGFYQGD SAQALALVRV KVDASHGCYP TISGHKNRFA IHFVQFEQQR HSDRSIDFLL
ATCA