Gene Shew185_3937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3937 
Symbol 
ID5369930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4683535 
End bp4684098 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content47% 
IMG OID640832200 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_001368122 
Protein GI153002441 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTTTG AATTGGGTTG GTGTGAGGGT GCAAGGCGTT GTGAGTCACC ACATTTTAAT 
CAACGTCCCT TGGGTGAAGT GAGTTTGTTG GTGATCCATA ATATTAGCCT GCCAGCAGGT
TGCTTTGGAT TACCTTATAT TGATCAATTA TTTCAAGGGT GCTTAGATAC CAATGCCGAT
GCCAGTTTTG CACAGCTGCA GGGCTTGGAA GTCTCGGCGC ACTTTTTGAT CCGCCGTAAT
GGCGAGCGTG TGCAGTACGT GAGTTGTAAC GACAGGGCTT GGCATGCTGG GGTGTCTCGT
TATGGCGAGA GAGAGAATTG TAATGATTTC TCCATTGGTA TTGAGCTGGA AGGCACAGAT
ACTGAGCCTT ACACGTCTGA GCAATATCAG TCACTGACAG CGTTGACGCA AGCACTGTTG
GCTGAGTATC CATCGCTGAG TACCGAACGA ATTGTGGGTC ATTGTGATAT TGCGCCAATG
CGCAAAACAG ACCCTGGACA AAGTTTTGAT TGGGAAAGAT ATTTAGGGAA GCTAAAGGAA
TATACTCAGG CGTTGCGCTC TTAG
 
Protein sequence
MRFELGWCEG ARRCESPHFN QRPLGEVSLL VIHNISLPAG CFGLPYIDQL FQGCLDTNAD 
ASFAQLQGLE VSAHFLIRRN GERVQYVSCN DRAWHAGVSR YGERENCNDF SIGIELEGTD
TEPYTSEQYQ SLTALTQALL AEYPSLSTER IVGHCDIAPM RKTDPGQSFD WERYLGKLKE
YTQALRS