| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3936 |
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| Symbol | |
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| ID | 5369929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4682614 |
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| End bp | 4683465 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640832199 |
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| Product | regulatory protein AmpE |
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| Protein accession | YP_001368121 |
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| Protein GI | 153002440 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.501947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAT TTTCACTCTT GGTCGCCATT TTAGTGGAGC GACTTAAATT TCTTCCTTCA
TCATGGCAAT TTGATCGTTT ATTGCAATCC TACCAAACGA CGTTTTTTGG TGATAAAGCC
TCACTGACGA GCGTTATGAT GGCGCTGGCG TTAGTGCTGC CAGCCTTGTT GGTGTATGTA
TTGTCTTGGT TAGTGGCGGG GATGTTTTGG GGCTTATTAA GTTTAGCGCT ATGGATTGTC
GTAGCGGTGG TTTGTTTTAA CCATCAGAAA CAGCGTGATA TTTTCAAGAA ATATATGCAA
GCGGCTTGTC GCTCCGATGT GCAAGCTTGT TACCATTATG CCGCCGAGCT TGATTGTAGC
GAGTGTTTGG ATGCGGTATC CGAGAAAGAC CTTGGCGCCA AAGTGGGTCA AAGTGTCGCT
TGGATTAACT ATCGTTATTA CGGTGCCGTT GCTTTGTTCT TCATTTTTCT GGGGCCAGTC
GGTGCTGTAT TGTATTGCAC TGTGCGTTTT TATGCCGAAG AAAATGCCCG CAAATCCCTT
GATCTGCCAT TAGTCAACGA AGTGATTAGC GTGTTGGATT GGTTGCCTAG CCGCATCTTT
GCCTTTGGTT ATGCGTTAAG TGGCCAATTT AGCGAAGGGT TAGCCGCGTG GCGCCATCAT
GGTTTGACCA TAAATACCAG TGCTCGCACT GTCGTTGTTG AGACGGCATT AGCAGCGCAA
CCTTTACCTG AGGTCGCTAG TGCACCTATA TGTGTACAGT CAACCTTGGC ATTATTAGTA
CTGAGTAAAC GCAACTTTAC ACTGATCGTC GCGGTACTGT CACTGCTGAC CATTTTTGGA
TTGGTGAGTT AA
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| Protein sequence | MALFSLLVAI LVERLKFLPS SWQFDRLLQS YQTTFFGDKA SLTSVMMALA LVLPALLVYV
LSWLVAGMFW GLLSLALWIV VAVVCFNHQK QRDIFKKYMQ AACRSDVQAC YHYAAELDCS
ECLDAVSEKD LGAKVGQSVA WINYRYYGAV ALFFIFLGPV GAVLYCTVRF YAEENARKSL
DLPLVNEVIS VLDWLPSRIF AFGYALSGQF SEGLAAWRHH GLTINTSART VVVETALAAQ
PLPEVASAPI CVQSTLALLV LSKRNFTLIV AVLSLLTIFG LVS
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