| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3920 |
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| Symbol | hemE |
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| ID | 5371057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4652289 |
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| End bp | 4653353 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640832181 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001368107 |
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| Protein GI | 153002426 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAT TAAAGAATGA TCGTTATTTA CGCGCCCTAC TAAAAGAGCC AGTCGATGTG
ACCCCTGTGT GGATGATGCG TCAAGCTGGC CGTTATCTTC CTGAATATAA AGCCACGCGC
GCGCAAGCGG GTGACTTTAT GTCTTTGTGT AAAAACCACG AGCTTGCCTG TGAAGTTACG
CTGCAGCCTC TACGCCGATA TGATCTGGAT GCGGCGATTC TGTTTTCCGA TATTTTAACT
GTGCCTGATG CTATGGGTTT AGGTTTGTAT TTTGAGGCGG GTGAAGGCCC ACGTTTCGAG
CGCCCTACAG ACACTATCGA TGCAATTAAA AAGCTATCAA TCCCAGATCC AGAAGATGAG
CTTGGCTATG TAATGAAAGC CGTGAGCACT ATTCGCCGTG AGCTTAATGG CGCTGTGCCG
TTAATTGGCT TTTCTGGCTC GCCATGGACC TTAGCCACTT ATATGGTTGA AGGTGGCTCG
AGCAAAACCT TCGAAAAAAT TAAAAAGATG GCTTACGCTG AGCCAATGGC ATTACACATG
CTGTTAGACA AGCTAGCTGA TTCAGTGATC TTATACCTGA ATGCCCAAGT CGCCAACGGC
GCACAATCTT TGATGATTTT TGACTCATGG GGCGGCGCGT TATCGCACTC AGCTTATCGT
GAGTTCTCTT TACATTACAT GCAGAAGATT ATTGATGGTC TGACACGCTT TGCCGATGGC
CGTAAAGTGC CTGTGACGCT GTTCACTAAA GGCGGCGGCT TATGGTTAGA AGCCATGGCA
GAAACAGGTT GTGATGCGCT CGGTTTAGAT TGGACGGTAG ACATTGCCGA TGCCCGTCGC
CGTGTTGGTC ATAAAGTGGC CCTGCAAGGC AACATGGACC CTTCAATGTT GTATGCACCT
ATTCCACGCA TCGAAGAAGA AGTGGGCCAT ATCCTAGCAG GTTATGGTGA AGGTACTGGT
CATGTATTTA ACTTAGGCCA CGGTATCCAT CAGCATGTCG ATCCAGAACA TGCTGGCGCC
TTTATTAAGG CGGTTCACGC ACAATCAAAG CAATACCATA AGTAA
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| Protein sequence | MAELKNDRYL RALLKEPVDV TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNHELACEVT
LQPLRRYDLD AAILFSDILT VPDAMGLGLY FEAGEGPRFE RPTDTIDAIK KLSIPDPEDE
LGYVMKAVST IRRELNGAVP LIGFSGSPWT LATYMVEGGS SKTFEKIKKM AYAEPMALHM
LLDKLADSVI LYLNAQVANG AQSLMIFDSW GGALSHSAYR EFSLHYMQKI IDGLTRFADG
RKVPVTLFTK GGGLWLEAMA ETGCDALGLD WTVDIADARR RVGHKVALQG NMDPSMLYAP
IPRIEEEVGH ILAGYGEGTG HVFNLGHGIH QHVDPEHAGA FIKAVHAQSK QYHK
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