Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3911 |
Symbol | |
ID | 5371312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4637682 |
End bp | 4639223 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640832172 |
Product | permease |
Protein accession | YP_001368098 |
Protein GI | 153002417 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACTGA AGAATTTTAT CGATCTGTTT TTAGACTCGG CGCCTTGGTT ATTATTAGGC CTGATCCTGG CTGGGCTATT AAAAGTATTC GTGCCAATGG TGTGGATGCA AAAGCAGCTC GGCGGTCACG GTTTTAAAAC TGTGGTGAAG GCGGCGTTGC TCGGTGCACC TTTACCTTTG TGTTCTTGTG GCGTGATTCC TGCGGCGGTA GGGTTACGCC GTTCAGGAGC CTCTAAAGCG GCAACTACCT CCTTTTTAGT GTCGACGCCA GAAACAGGCG TCGATTCAAT CGCCGTTTCC TACGTGTTAC TCGGCCCCTT TATGGCGATC GTCAGACCGA TTGCTGCGAT TACCAGTGCG ATTGTGGCTG GCTTACTCGT TGGCCGCGAT GACGACGATG GCAAGCCTGC GGTTAAATCA GAGTCCAAGT CAGCTAGCGA CGCACCCGTG GCGGCCTGCT GTGCGTCGAA ATCGGCGAGT CAGTCCCAAG CTATTAAAGC TGAACCGGTT AAAGGCTGTT GCTCATCAAC TAAAGAGCCA ACTTTAGCGC CTGTTAAAGC GGCTGCATCC TGCTGCGGCA ATGAAAGTCC TGCAGATAGT GAGCATAAGA CTGAGCCTAA GAGTGCGATC AAAATGACGC CTATGGCTGC AACGTCTAGC TTAATGGCCG CCGCGCCGAG TTTAATGGCA AATCATGGAC ATACGGGCAT TGGCAGTTTA GCGAATGACG GGGTGATAAA AGCTGAGAAA ACAGCCTCAT GCTGCGCCAG TAAAACAGCT GAATCCGTAC CTGCTACCCC TGAAAAAATC CTTGTGGTAA AAAAGGGTGC CTGTTGCGGC ACTTCAAACA CAGCCGAGTC TGAAACACAT GATCACAGTG CTCACGGCCA TGGTTCTCAA ACCCAAGGTG AAGCGGATAG CTGCTGCGCT TCGACCCAAG ATATGGCGAC TGAGTTAAAG TCGCAATCCG TATTAAGCCG TGTCGGTATT GGTCTTAAAT ATGCGGCAAC GGATTTAGTG CGTGACACTA CCTTGTGGCT GTTGGTGGGC TTATTCTTCG CCGCGCTGGT GCAAACCTAT GTCCCTGCTG ACTTTTTGGC GCAATGGGGC GACGGTATCT TAGCCATGTT AGTGATGGTG TTGGTCTCTG TGCCTATGTA TATCTGCGCG ACGGCATCGA CACCGATTGC TGCCGGACTA TTGCTGGCGG GTGTGTCACC GGGTGCCGTT TTAGTGTTTA TGATGGCGGG TCCTGCGACT AATATCGCAA CCTTAGGTGT TGTGGCTAAA GAGTTAGGTA AACGTGCGTT GTGGGGATAC CTGGGCGGCG TGATTGGCGT GGCCTTAGTC GCGGGCATAT TGGTCAATTA TCTGGTGGAT AGCTTTGGCT TTGTGGTGAT GCCACAGATT GGTGAGCAGC ACCAAATGTT ACCTCAGTGG TTAGTGGCAA CCTCTGGCAT AGTGCTGGCG TTACTCATGG CAAAAGTGGT GTTTGAAAAG ATCCCTCGAA GCTGGATCCG CCGCAACGAT TGCTGTTCTT AA
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Protein sequence | MLLKNFIDLF LDSAPWLLLG LILAGLLKVF VPMVWMQKQL GGHGFKTVVK AALLGAPLPL CSCGVIPAAV GLRRSGASKA ATTSFLVSTP ETGVDSIAVS YVLLGPFMAI VRPIAAITSA IVAGLLVGRD DDDGKPAVKS ESKSASDAPV AACCASKSAS QSQAIKAEPV KGCCSSTKEP TLAPVKAAAS CCGNESPADS EHKTEPKSAI KMTPMAATSS LMAAAPSLMA NHGHTGIGSL ANDGVIKAEK TASCCASKTA ESVPATPEKI LVVKKGACCG TSNTAESETH DHSAHGHGSQ TQGEADSCCA STQDMATELK SQSVLSRVGI GLKYAATDLV RDTTLWLLVG LFFAALVQTY VPADFLAQWG DGILAMLVMV LVSVPMYICA TASTPIAAGL LLAGVSPGAV LVFMMAGPAT NIATLGVVAK ELGKRALWGY LGGVIGVALV AGILVNYLVD SFGFVVMPQI GEQHQMLPQW LVATSGIVLA LLMAKVVFEK IPRSWIRRND CCS
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