Gene Shew185_3911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3911 
Symbol 
ID5371312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4637682 
End bp4639223 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content52% 
IMG OID640832172 
Productpermease 
Protein accessionYP_001368098 
Protein GI153002417 
COG category[R] General function prediction only 
COG ID[COG0701] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACTGA AGAATTTTAT CGATCTGTTT TTAGACTCGG CGCCTTGGTT ATTATTAGGC 
CTGATCCTGG CTGGGCTATT AAAAGTATTC GTGCCAATGG TGTGGATGCA AAAGCAGCTC
GGCGGTCACG GTTTTAAAAC TGTGGTGAAG GCGGCGTTGC TCGGTGCACC TTTACCTTTG
TGTTCTTGTG GCGTGATTCC TGCGGCGGTA GGGTTACGCC GTTCAGGAGC CTCTAAAGCG
GCAACTACCT CCTTTTTAGT GTCGACGCCA GAAACAGGCG TCGATTCAAT CGCCGTTTCC
TACGTGTTAC TCGGCCCCTT TATGGCGATC GTCAGACCGA TTGCTGCGAT TACCAGTGCG
ATTGTGGCTG GCTTACTCGT TGGCCGCGAT GACGACGATG GCAAGCCTGC GGTTAAATCA
GAGTCCAAGT CAGCTAGCGA CGCACCCGTG GCGGCCTGCT GTGCGTCGAA ATCGGCGAGT
CAGTCCCAAG CTATTAAAGC TGAACCGGTT AAAGGCTGTT GCTCATCAAC TAAAGAGCCA
ACTTTAGCGC CTGTTAAAGC GGCTGCATCC TGCTGCGGCA ATGAAAGTCC TGCAGATAGT
GAGCATAAGA CTGAGCCTAA GAGTGCGATC AAAATGACGC CTATGGCTGC AACGTCTAGC
TTAATGGCCG CCGCGCCGAG TTTAATGGCA AATCATGGAC ATACGGGCAT TGGCAGTTTA
GCGAATGACG GGGTGATAAA AGCTGAGAAA ACAGCCTCAT GCTGCGCCAG TAAAACAGCT
GAATCCGTAC CTGCTACCCC TGAAAAAATC CTTGTGGTAA AAAAGGGTGC CTGTTGCGGC
ACTTCAAACA CAGCCGAGTC TGAAACACAT GATCACAGTG CTCACGGCCA TGGTTCTCAA
ACCCAAGGTG AAGCGGATAG CTGCTGCGCT TCGACCCAAG ATATGGCGAC TGAGTTAAAG
TCGCAATCCG TATTAAGCCG TGTCGGTATT GGTCTTAAAT ATGCGGCAAC GGATTTAGTG
CGTGACACTA CCTTGTGGCT GTTGGTGGGC TTATTCTTCG CCGCGCTGGT GCAAACCTAT
GTCCCTGCTG ACTTTTTGGC GCAATGGGGC GACGGTATCT TAGCCATGTT AGTGATGGTG
TTGGTCTCTG TGCCTATGTA TATCTGCGCG ACGGCATCGA CACCGATTGC TGCCGGACTA
TTGCTGGCGG GTGTGTCACC GGGTGCCGTT TTAGTGTTTA TGATGGCGGG TCCTGCGACT
AATATCGCAA CCTTAGGTGT TGTGGCTAAA GAGTTAGGTA AACGTGCGTT GTGGGGATAC
CTGGGCGGCG TGATTGGCGT GGCCTTAGTC GCGGGCATAT TGGTCAATTA TCTGGTGGAT
AGCTTTGGCT TTGTGGTGAT GCCACAGATT GGTGAGCAGC ACCAAATGTT ACCTCAGTGG
TTAGTGGCAA CCTCTGGCAT AGTGCTGGCG TTACTCATGG CAAAAGTGGT GTTTGAAAAG
ATCCCTCGAA GCTGGATCCG CCGCAACGAT TGCTGTTCTT AA
 
Protein sequence
MLLKNFIDLF LDSAPWLLLG LILAGLLKVF VPMVWMQKQL GGHGFKTVVK AALLGAPLPL 
CSCGVIPAAV GLRRSGASKA ATTSFLVSTP ETGVDSIAVS YVLLGPFMAI VRPIAAITSA
IVAGLLVGRD DDDGKPAVKS ESKSASDAPV AACCASKSAS QSQAIKAEPV KGCCSSTKEP
TLAPVKAAAS CCGNESPADS EHKTEPKSAI KMTPMAATSS LMAAAPSLMA NHGHTGIGSL
ANDGVIKAEK TASCCASKTA ESVPATPEKI LVVKKGACCG TSNTAESETH DHSAHGHGSQ
TQGEADSCCA STQDMATELK SQSVLSRVGI GLKYAATDLV RDTTLWLLVG LFFAALVQTY
VPADFLAQWG DGILAMLVMV LVSVPMYICA TASTPIAAGL LLAGVSPGAV LVFMMAGPAT
NIATLGVVAK ELGKRALWGY LGGVIGVALV AGILVNYLVD SFGFVVMPQI GEQHQMLPQW
LVATSGIVLA LLMAKVVFEK IPRSWIRRND CCS