| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3909 |
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| Symbol | |
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| ID | 5371401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4635702 |
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| End bp | 4636403 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640832170 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001368096 |
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| Protein GI | 153002415 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTCG ATAAATTCCT CTGTAAAAGC ACAGATCTTG ATCGTGATGC CGCAAGTGTC
GCCATTCTTA GCGGCTCAGT CACAGTCAAT GGCGTTATCG CGACAGACTG CGCAATGCAA
GTGCATGAAA ATAATGCCGT CTGCTTTAAT GGAAAGTCGC TAGTGCCACG TCCATCCCGC
TATTTCATGT TGCACAAACC CGCCGATACC TTGTGTTCGA ATGTAGATGG CGCCTACCCT
TCGCTGTTTC ATCTGCTCGA TATTGAGCGT GCATTTGACC TACACATCGT TGGTCGCTTA
GATGCCGATA CCACGGGCTT AGTGCTACTC ACAGACGATG GCCGCTGGTC GTTTAATATT
ATCTCGCCTC AATATCAGTG CAAAAAAGTC TATCGTGTCC AACTGCGAGA TCCACTCGAC
AGCGAGGCGA CTGCAGCCAT AGCCGCAACG TTTACCGCAG GGCTGCAATT ACAGGGCGAA
ACTGCCCTCA CTCTGCCAGC AACACTGCAG CAAGTGGATG ACAAAACCGT GCTACTCACG
CTCACCGAAG GCAAGTTTCA TCAAGTTAAA AGGATGTTCG CTGCCGTGGG CAATAAAGTG
GTTGCCCTGC ACAGGGCACA AATTGGCGCA GTTACCTTAG ATGTGGACGT TGGAGAATGG
CGCGAGTTAA CCTTAGCCGA GATAGCCTCC TTCACAGCCT AA
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| Protein sequence | MRLDKFLCKS TDLDRDAASV AILSGSVTVN GVIATDCAMQ VHENNAVCFN GKSLVPRPSR
YFMLHKPADT LCSNVDGAYP SLFHLLDIER AFDLHIVGRL DADTTGLVLL TDDGRWSFNI
ISPQYQCKKV YRVQLRDPLD SEATAAIAAT FTAGLQLQGE TALTLPATLQ QVDDKTVLLT
LTEGKFHQVK RMFAAVGNKV VALHRAQIGA VTLDVDVGEW RELTLAEIAS FTA
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