| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3904 |
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| Symbol | |
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| ID | 5371574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4630010 |
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| End bp | 4630993 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640832165 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001368091 |
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| Protein GI | 153002410 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCATCGG ATACGGCAGC AGAACACATC AAGCAACTTC AGGCTGAAAT TGCTCAGCTC
AAACGCGAAA ACGCCCAGTT AACGGCGTTG AATCGTCGTG CCGAAGAAAA ACTGTTTGCT
GCCCTCGATG GCAATGGCTT GTGCCTGTGG GAACAGCATA TTCCAAGTGG GAATTTAACG
ATATTCAATA TGCGCTGGGG CGAAATGCTC GGTTTTAGTC CTGAAGAATT AGCCGCCCAC
GTTGATATCT GGAAAAGTAA GTTACACCCA GAAGATAAAG CATGGGTGAT AAAAGCCTTT
GAAGATCATG TCAGTGGTAA GGCCGATTAC TATCAGGCAG TACACAGAAT GTTGCATAAA
GATGGTAGCG TTACTTGGGT GTCTGACCGT GGCCGTATCG TTGAGCGTTT TGCCGATGGC
ACGCCGCTGC GGATGATGGG CAGCCATATC GATATCACCC AAGAAAAACG CTACGAACTG
GATCTGGCAC TGTTAGCTCA CAGCGATCCC CTCACCAACT TAATGAATCG CCAAGCCATA
GCCAAAGCGT TCGATGAGTG TTTGCAACCC GAGATGCGCG GCGCATTATT CTTTATCGAT
CTGGATGGTT TTAAAGCCTT AAATGATCGT CACGGCCATA AGTTTGGCGA CAATTTATTG
GTGCATGTGG CGCATACATT AGTGTCTCAT TCGGGTGAGT TAGCGAAGAT CGCTCGGCTA
GGTGGCGATG AGTTTGTGAT CATACTGCCG TCCTCGGATA TTGAATCTTT AGCTATGCTC
GCACAATCCT TGCTCGATGT TTATCGACAG GGCTTTTTGC TTGAAGGTTG TGACGTGGAG
ATAGGCCTGA GTATCGGTAT CGATATATTT AGCTATGGTG ATAGTTTTGC CAAAAGCTGC
GATCGCGCGG ATGCTGCTAT GTACCGCGTG AAACACCAAG GTAAAAATGG CTACCGCTTT
TACCAGCAAG CTGATGATTG CTAA
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| Protein sequence | MASDTAAEHI KQLQAEIAQL KRENAQLTAL NRRAEEKLFA ALDGNGLCLW EQHIPSGNLT
IFNMRWGEML GFSPEELAAH VDIWKSKLHP EDKAWVIKAF EDHVSGKADY YQAVHRMLHK
DGSVTWVSDR GRIVERFADG TPLRMMGSHI DITQEKRYEL DLALLAHSDP LTNLMNRQAI
AKAFDECLQP EMRGALFFID LDGFKALNDR HGHKFGDNLL VHVAHTLVSH SGELAKIARL
GGDEFVIILP SSDIESLAML AQSLLDVYRQ GFLLEGCDVE IGLSIGIDIF SYGDSFAKSC
DRADAAMYRV KHQGKNGYRF YQQADDC
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