Gene Shew185_3895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3895 
Symbol 
ID5372148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4621603 
End bp4622058 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content50% 
IMG OID640832156 
ProductNUDIX hydrolase 
Protein accessionYP_001368082 
Protein GI153002401 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCTTTA ACGATACCTT TAGACTGAGC AGCCACGCGG TTATTACTAA TGCGCAGGGA 
CAAGTGCTGT TGCTTAAGGC TAATTACGGT AATTTTGCTT GGGGCTTGCC CGGCGGCGCA
CTCGAGCCTG GTGAAACGAT TCACGAGGCC TTGGTGCGCG AATGCCAAGA GGAATTAGGC
TTAAGTGTGC GGGTTAACTA TTTGAGCGGC GTGTATTATC ACAGCGCCTA TCAATCCCAA
GCCTTTATCT TTCGTTGTGA ACTGGTGTTG CCTGAGTTGC CTGAGGGACA TGAGGTGGCA
AAAGATGGTG CAGAAAACGA GCCACTGCCG ATCCACTTAA GTCACGAACA TTCAGAGTTT
GCCTTCCACG ATATCGACAC CCTTAGCGCG GTTCAGCAGC AAAGAATCAA AGATTGCCTC
AATTTCAACG GGGTTGTCAT GAGTGCAAAG TTTTAG
 
Protein sequence
MAFNDTFRLS SHAVITNAQG QVLLLKANYG NFAWGLPGGA LEPGETIHEA LVRECQEELG 
LSVRVNYLSG VYYHSAYQSQ AFIFRCELVL PELPEGHEVA KDGAENEPLP IHLSHEHSEF
AFHDIDTLSA VQQQRIKDCL NFNGVVMSAK F