| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3890 |
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| Symbol | |
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| ID | 5372180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4613884 |
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| End bp | 4614966 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832151 |
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| Product | TMAO reductase system periplasmic protein TorT |
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| Protein accession | YP_001368077 |
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| Protein GI | 153002396 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02955] TMAO reductase system periplasmic protein TorT |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTTGA CTGCATTCTT CGCCCGTTCC CTCAGGATTT GCCTCCTCTT AATCCTCAGT
AGTTTCGTCT TTGCAGTGCA GGCAGCTTGG TATCCCGCCG ATGTCATTGC CGACGGTCAA
AAGACCCTCT ACACGCCACT CACTAAGGCC AATAAAGCAT GGCGGATCTG CGCCTTACTT
CCCCACGGTA AAGATCAATA TTGGTGGGGC GTCGCCTTTG GATTATCACA AGAAGCCGAG
CGCCAAGGCG TAACGCTTGG CATTTATGAT GCTGGTGGAT ATGACAAGAT TGAGCAGCAA
AAACAGCAAC TCCATGATTG TTATGCACTC AAGGCTCAAG CTTATATTAT TGCCGCCAAT
ACCGCTGACG GACTGATTGC GGATATTGAA CAACTCAGCG CTGCGGGCAT TCCGGTTATC
GATTTAGTCA ATGGTATCGC GACCGACAAA CTCACGAGTC GCTCCTTAGT CAGCTTTGAA
GATATGTCCG TTGCGGCGAC AGAATATATT GCGGCGCTGC AGCGAGAAGC TATCAATCAG
GAGTCACCTA AGCTTAAGGT GGCGTGGTTT CCTGGGCCTA AGGGCGCATC TTGGGTGATG
GCGGCGGAAC AAGGGTTTAG ACAAGCGGCA GCCAAACAAG CGTTCGAGGT TATTGAAGGC
GGTTACGGTA CGACTGAGTT ATTCGTTCAA GCGGATTTGG TGCGAAAAGT ACTTGCAAAA
CAAAGCATAG ATTATGTAAT TGCCAATGCG GTGGCGGCCA CGTTCGCGGC GCGCTTTCTA
GATGGACGCC GGAATCAAAC CGGCAAAGTC ATCGCATTTT ACTCTAATGC GCAAACTATA
GAATTAGTGC ACAAAAAGCA GCTACTCGCA ACGGTCAGCG ACTCACCGGT ATTGCAGGCT
CGAATTGCCA TCGATCTGGC GGTGCGCGCA CTCGAAGGTG CGCCTTATCC CCGCAGAGTG
AGCCCTGTTA TCAAGGTCAT CTCCCAAGAC AACATCCACC AAATCGATTT AGAACAAATA
TTAGCGCCGG AAAATCAATG GATGATCCAT CAGGATCTCC CCAGCTTAAA CGGTGTTCGT
TAA
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| Protein sequence | MHLTAFFARS LRICLLLILS SFVFAVQAAW YPADVIADGQ KTLYTPLTKA NKAWRICALL
PHGKDQYWWG VAFGLSQEAE RQGVTLGIYD AGGYDKIEQQ KQQLHDCYAL KAQAYIIAAN
TADGLIADIE QLSAAGIPVI DLVNGIATDK LTSRSLVSFE DMSVAATEYI AALQREAINQ
ESPKLKVAWF PGPKGASWVM AAEQGFRQAA AKQAFEVIEG GYGTTELFVQ ADLVRKVLAK
QSIDYVIANA VAATFAARFL DGRRNQTGKV IAFYSNAQTI ELVHKKQLLA TVSDSPVLQA
RIAIDLAVRA LEGAPYPRRV SPVIKVISQD NIHQIDLEQI LAPENQWMIH QDLPSLNGVR
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