| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3888 |
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| Symbol | |
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| ID | 5372401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4612069 |
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| End bp | 4613118 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640832149 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001368075 |
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| Protein GI | 153002394 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTGCC AGTTAACCCG ATTATTTGGA ATCGAATTGC CAATTATTCA AGCGCCTATG
GCGGGTGTTC AGGGCAGTGC TTTAACGATA GCCGTGTCGC AAGCGGGTGG TCTTGGCTCC
TTGCCCTGTG CCATGTTATC CCTCGAAGCC TTAGGTGCCG CCCTGACACA GATCCGTGCC
CAAACGACTA AGCCCATCAA TGTAAACTTC TTTTGTCATT ACGAGCCCGA ACCGCAAGCG
GCGAAACAAG CCATGTGGCT CAAGCAACTC GCGCCTTATT TTGCTGAGCT GGGTATCCAT
CCTGATACCC AAGCTGCGGG AGCACAACGC GCGCCCTACA CGAGTGCTCA GGCTGAAGTG
TTAGCTAAAT TCAAACCTGA GGTTGTGAGT TTTCACTTTG GTTTACCTAA TGAAGATTTG
CTGCTGGAGA TAAAGTCTTG GGGTTCTAAG ATCATCTCGA CGGCGACCAC AGTGGAAGAA
GCGCTCTGGT TAGAAGCGCG CGGCGTAGAT GCCATTATTG CGCAGGGCTT AGAAGCTGGC
GGCCATAGAG GACATTTCTT ATCCGATGAT TTGACTGAGC AACACGGCAC TTTTAGTTTA
TTGCCGCAAA TCATTGCCGC CGTTGATGTG CCCGTTATCG CCGCAGGTGG CATAGTCGAT
GCCAAAACCG TGCGCGCCGC CATGGCGATG GGCGCTTCGG CGGTGCAAGT TGGGACGGCT
TATTTACTTT GCCCTGAATG CACCACCAGT GAGATCCATC GCGCCGCACT GCAAAGCGAG
GCGGCGCACC ATACGGCTCT GACTAACTTA TTTTCTGGTC GCCCCGCACG CGGCATAGTG
AATCGTTTTA TGGCTGAACT TGGACCTATC AATAACGCAG TACCGGATTT TCCGCTCGCC
TCCAGTGCCG TCGCAGGATT GCGAAGCGCC GCCGAGCAAC AAGGGTTCGG CGATTTTAGC
CCACTTTGGT GCGGCCAAAA TGCAACCGGC TGTCAGGCGA TTCCCGCCGC AGAGCTAACA
AGACAATTGG CGTTAGGTTT GATAGTTTAA
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| Protein sequence | MPCQLTRLFG IELPIIQAPM AGVQGSALTI AVSQAGGLGS LPCAMLSLEA LGAALTQIRA
QTTKPINVNF FCHYEPEPQA AKQAMWLKQL APYFAELGIH PDTQAAGAQR APYTSAQAEV
LAKFKPEVVS FHFGLPNEDL LLEIKSWGSK IISTATTVEE ALWLEARGVD AIIAQGLEAG
GHRGHFLSDD LTEQHGTFSL LPQIIAAVDV PVIAAGGIVD AKTVRAAMAM GASAVQVGTA
YLLCPECTTS EIHRAALQSE AAHHTALTNL FSGRPARGIV NRFMAELGPI NNAVPDFPLA
SSAVAGLRSA AEQQGFGDFS PLWCGQNATG CQAIPAAELT RQLALGLIV
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