Gene Shew185_3881 details

Gene Information

• Locus tag: Shew185_3881
• ID: 5372772
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 4605726
• End bp: 4606304
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640832142
• Product: hypothetical protein
• Protein accession: YP_001368068
• Protein GI: 153002387

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCA CCCGCTTAAC TCAACCTATT TATGACCACT TATATCGTGA TATCAGTGAG 
TTTCGTAGCA CCTTCGACTT GCCTGTTAGT GATGTTGATT CCTTAGATGA CAAGGCCGAC 
ACCTTACATA CTTCATTGAT TATTGAAGAG TTAACTGAGC TAGCAGAAGC CGATAGCCGT 
ATCGAGCAAG CCGATGCCAT CGTCGATTCT GTGTATGTGT TAATGGGGCG TTTAGTGCAT 
TTAGGCGCAC AGGCCATGAC CGACAGACTC GAAATCAGCT ACCTGATTGA CTTACTGCTG 
TGTGTGGCAA AAAACCGTGA AATTGACTTT ATCGCCTGCT GGGACGAAGT GCATTCGAGC 
AATATGAGCA AAGTGTGCCG CAACGAGCAA GAACTGGCTG AGACAGTTGC CTTTTATGCT 
AAGCAAGGTG TTGAAATTGT TGGTAGTCAA CAAGGCGACT TCATCATAGC CAAATGTGCT 
AAAGATGTGG AAATGGCGGG TAAAGTGGTT CGCCAAGGCA AGGTACTAAA ATCGGTATAC 
TACCGCCCAG CGGATCTGAC TAAGCTGGTT AAAGCCTAA 

 

Protein sequence

MKLTRLTQPI YDHLYRDISE FRSTFDLPVS DVDSLDDKAD TLHTSLIIEE LTELAEADSR 
IEQADAIVDS VYVLMGRLVH LGAQAMTDRL EISYLIDLLL CVAKNREIDF IACWDEVHSS 
NMSKVCRNEQ ELAETVAFYA KQGVEIVGSQ QGDFIIAKCA KDVEMAGKVV RQGKVLKSVY 
YRPADLTKLV KA