Gene Shew185_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3879 
Symbol 
ID5371844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4604498 
End bp4604911 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content44% 
IMG OID640832140 
Productcytochrome C biogenesis protein 
Protein accessionYP_001368066 
Protein GI153002385 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCAT TATTTCGCTC ACCTTACCTC AGTGCTTTTA TCTGGTTGCT TTTTACCACG 
CTGTTTCTAG GCGGGACTGC ATTCCTCGCT ATGGCGCAAG AGCAACCTGT CTCTAACACT
GCTCATCAAC AACAAGCTAT GGATATCAGT AAACTGCTTC GCTGTCCTAT GGCAACAAAT
CTAAGCTTGT TTGAATCACA AGCCCCTATC GCACATGAGC TTAAAGCTCA AATTTTTTCC
ATGTTGGAAC AAGGAGATAG CCAAGATGAA ATCATTCTTT TTATGGTACA GCGCTATGGT
GAAAAAATTC GTTATCAACC CGAACTGAAA GGCTCTACGG TCGCACTTTG GTTTGGCCCG
CTACTCTTGC TATTAGTCGG TGTAGGTATT TGCCTTGGAC TCATTCAGCG CTGA
 
Protein sequence
MNPLFRSPYL SAFIWLLFTT LFLGGTAFLA MAQEQPVSNT AHQQQAMDIS KLLRCPMATN 
LSLFESQAPI AHELKAQIFS MLEQGDSQDE IILFMVQRYG EKIRYQPELK GSTVALWFGP
LLLLLVGVGI CLGLIQR