Gene Shew185_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3873 
Symbol 
ID5372733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4596871 
End bp4597578 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content50% 
IMG OID640832134 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001368060 
Protein GI153002379 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGAAA ATATAGAGAG ACGGAGGTTC CTTAAAAGCG CTGGCATGTG CTCTTTGATG 
TTAACGCCTT TAGCCGGGTG TTCGGTCAAA GAAGATGCTG ACAGCGCCCA TAAGCCCCAT
TACGTCATGG TCTTTGACCA AAATAAATGT GTCGGTTGTG GTGATTGTAA AACCGCCTGT
AACCAAGCAA ACAACTTACC CGCGGGTGTT TCTCGGGTGA TCCTTGAGCA GCAAAGTGGT
CGTGTTGAAG GTCAAGCCTG CCCTCACTGC GGCAAGATGG TTTGTGACTG TGAACGTAAG
TTTGTGCGGG TTTCCTGTCA GCAGTGCAAA AACGCCCCCT GTGTCACAGT TTGTCCAACG
GGCGCGGCGC ACCGCGACGC GAAAACGGGC ATAGTGACTA TGGATGCAAG TAAATGCGCG
GGCTGCAAAT ATTGTATCGG CGCATGTCCC TACAATGCGC GTTTGATCAA CGACAACACT
GATGTGGCTG ATAACTGTGA CTTCTGCTTG CACAGCAAGC TGTCTAAGGG CGAGCTACCC
GCATGCGTAC AGAGCTGTAA GTACGACGCG CTGATCTTTG GCGATGCCAA TGATCCTCAG
TCCTATGTCA GTAAGTTATT GGCGGTAAAA GACTCTGTGC GGATTAAGCC ACAGTTTGGT
ACTGAGCCGA GCTTACGTTA CATACCAATC GTCAAACTGG GAGTGTAA
 
Protein sequence
MSENIERRRF LKSAGMCSLM LTPLAGCSVK EDADSAHKPH YVMVFDQNKC VGCGDCKTAC 
NQANNLPAGV SRVILEQQSG RVEGQACPHC GKMVCDCERK FVRVSCQQCK NAPCVTVCPT
GAAHRDAKTG IVTMDASKCA GCKYCIGACP YNARLINDNT DVADNCDFCL HSKLSKGELP
ACVQSCKYDA LIFGDANDPQ SYVSKLLAVK DSVRIKPQFG TEPSLRYIPI VKLGV