Gene Shew185_3861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3861 
Symbol 
ID5373160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4579242 
End bp4581344 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content32% 
IMG OID640832122 
Producthypothetical protein 
Protein accessionYP_001368048 
Protein GI153002367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTAG ATATACGAGG AAGTAAGAAA ACAACCGGTA TTAGCGATAA TCAATTTGTT 
GTTTTCGAAG AGTTATTGTC AAATGCTATA GATTCATATT TGATTAGAAA ACATTCTGCA
AATGATATAT CAGCACTCAA TGTAAAATTT GAAATTGAAT TGTATCCAAA AGATTTATTT
TCAGAGGAAA AATTCGGATT AAAAATAACT TGTACTGATA ATGGTGCAGG TATGGCCGAT
CAGCAAGTAA AAGCATTTGT AACCAAAGAC TCTACTTTTA AAGATGACCT AAGAATCAAT
GGTATAGGAA GGTGCTTTGG TTCGGGGAGA GTTCAGTATT TTCATTTTTT TGACCGAGTA
AAAATCAGAA GCATTTTTGA AAAAGAAGGT GTTTTATTAT TGCGTACGTT AGATGTTGAA
AGTAATACAA ATGAGATATC TGAAGCATCT TTTATTACAA CAGAAGCTGA CAGTGATTCT
TTAGAGACCA GTGTTTCTTT AACCGGTATA TCAAATGCTG CAATGAGTAA ACATTTTATA
GCCAAAGATT TATCAGATGA GTTCTCTGCC GAAAATATTA AGCATCATAT CTTGATTACA
TTTCTACAGA GATTCATAGC ACTTAAAAAT ATAATAGGTG ACTTTTTAAT TGAAATAGTT
TTTTCTATAA ATGGTTCTAG TGATAATATA ACAGTTATAA ATTCATTAGA TTTGCCAAAT
AAACTTCCAG TAGTGCAGTT GCCTATTTGT TGTCTACATG GGCTGGATAC TAAATTACCT
GAGAACACTC TTATTGTTAG TACTTATGAA TTTTCTGAAA ATAAATATCC AAGCTTTGTC
CATGATGTAG CGCTGTGTGC GAACTCATCA ATAGTAAAAT ATCTTACAAA TACATTTTTA
AAAGTAAGAA AGGATAGAAC TAAAGCGATA AATAATAAGT TTTATCTAAT TTTAATCGAA
AGTAATTATT TAGAACATAA AGTAAATATT CGACGTGACA ACTTTGATAT ACGAACAAGT
TGTAGACATA GCGATATGAT ATCTATTGAA CCATCGATGG AGGATATTAT AGATTCGCTC
GAGGACTACG TTTTAAGTAT ATTAACTCCA ACCGATTTTG ATAGGGAACT TTTAATTAAA
GAAACTGGTG TGAAATTTGG TATATCACAA AGCATGCTTA TAGAGACTAG AGTTAAAGTC
AAGTATGGTG ATACTGCTGA CATGATAGCT AAGCGTGTAT TAAAAAAATA TCAAGAAGAG
ATTGTTAATG ATACCGCAAG TATTTTTGAC ATGAAACAGA AGTTAATAGG GTTAGATCCT
AGAAAATCTG ACTTTCGTGA CAATGTTAAT GCTATGTCTT GGAAGTATAC ATCAACAATC
AAGAAAATGG ATATGGCTAA TTTATCTCAA CTAGTTGTTA GGCGATCAGC TATGTTAGAG
GTTCTTGCTT GCGCTATTAA AGGTGAGTTA TCAGTTCAAG ATCGTACAAG TGGGCGAAAT
GAAAATGAAA AGTTAATTCA TAATATATTT TTCCCAACAG GTAAGGATAG TCAAGATCTA
ATAGACCATG ATATATGGAT TCTAAATGAA GAGTATCATT ACTTTGAACA TATTGCGTCT
GACAAAGCGT TGGCATCTAT TCCTTGGAAT GACAGTGACA AATTATTTGA TGTAAATATT
GACAGTGAGT TGGAGGCACT TTTCAATAAA AACAATTCTG AAAACAGATT GAAAAGACCT
GACATTGCAA TATTTAATCA AGAGGGTGCT GCTATTATTA TTGAGTTTAA GGCTCCGGGG
GTTGAACTTC AGGAACACAC TAATGATCTT GTTCAATATG CTAGATTGTT GGCAGCTAAG
TCAAAAGGTA GGATTAGAAA ATTTTATGGT TATTTAATTG GCGATAAAAT AGATGAGAGT
CGACTGTCAT CTACATATAC AAAATTCGCA AGTGGTAATG GTTATTTTAA TACAGATAGA
ATTAATGATT TTGCGACTGG TATACAATAT GGTGAGTTAT ATTCAGAAGT GTTGTTCTAT
AAAGACTTTG TTGATCGTGC AGAGCAACGT TTGAAAATTT ATAAAGAAAA ACTTGGAATG
TGA
 
Protein sequence
MTLDIRGSKK TTGISDNQFV VFEELLSNAI DSYLIRKHSA NDISALNVKF EIELYPKDLF 
SEEKFGLKIT CTDNGAGMAD QQVKAFVTKD STFKDDLRIN GIGRCFGSGR VQYFHFFDRV
KIRSIFEKEG VLLLRTLDVE SNTNEISEAS FITTEADSDS LETSVSLTGI SNAAMSKHFI
AKDLSDEFSA ENIKHHILIT FLQRFIALKN IIGDFLIEIV FSINGSSDNI TVINSLDLPN
KLPVVQLPIC CLHGLDTKLP ENTLIVSTYE FSENKYPSFV HDVALCANSS IVKYLTNTFL
KVRKDRTKAI NNKFYLILIE SNYLEHKVNI RRDNFDIRTS CRHSDMISIE PSMEDIIDSL
EDYVLSILTP TDFDRELLIK ETGVKFGISQ SMLIETRVKV KYGDTADMIA KRVLKKYQEE
IVNDTASIFD MKQKLIGLDP RKSDFRDNVN AMSWKYTSTI KKMDMANLSQ LVVRRSAMLE
VLACAIKGEL SVQDRTSGRN ENEKLIHNIF FPTGKDSQDL IDHDIWILNE EYHYFEHIAS
DKALASIPWN DSDKLFDVNI DSELEALFNK NNSENRLKRP DIAIFNQEGA AIIIEFKAPG
VELQEHTNDL VQYARLLAAK SKGRIRKFYG YLIGDKIDES RLSSTYTKFA SGNGYFNTDR
INDFATGIQY GELYSEVLFY KDFVDRAEQR LKIYKEKLGM