Gene Shew185_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3860 
Symbolfre 
ID5373159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4578163 
End bp4578873 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content51% 
IMG OID640832121 
ProductFMN reductase 
Protein accessionYP_001368047 
Protein GI153002366 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA TACGTTGTAA GATAGAGAAA GTTAGCCCAT TTAACGATGC CGTATATCAA 
GTATTGTTAA GGCCAGAAAC CGCCTTCGAT TTCCAAGCGG GGCAATACTT ATGTGTTGTC
ATGGGTGAAA AAGATAAACG TCCCTTCTCT ATCGCGTCAG CGCCAAACGC CGAGCTGATC
GAATTACACA TTGGCGCCGC TGTCAGTGAA AGCTACCCAA TGCAAGTGGT CGAGCGCCTG
AAAGCCTGCG CCATTGATGG CAGCACTATC GATATCGAAG CCCCAGGCGG CGAAGCCCAC
CTGCGCCACG AAAGCCAACG CCCTCGCCTC TTAATCGCCG GCGGCACAGG TTTCTCTTAC
ATTAAAAGTA TCGTCGAGCA CCAAATCGCC ATTGGCCAAC AGGTTAAAAC CACCCTGTAT
TGGGGTTGCC GCACCCAAGA TGCCATGTAT TTTGAAGCCA TCGCCCGCCA ATGGCACGAT
GCCCACCCTT GGTTGAACTT CGTCCCAGTG ATCGAAGAAG CCCCAGCCAA TTGGCAAGGT
AAAACCGCCA ATCTGTTAGC GCAAATCAAG CAAGATTTTG TCAGCTTAAA TGGCTACGAC
ATCTACATCG CCGGCCGTTT CGACATGGTG GGTGCAGCAC GGGAAATCTT CCGTGAGATT
GGTGTAGAAG AAGCGCATCT CTATGGTGAT GCGTTCGCGT TTATCAAATA A
 
Protein sequence
MKTIRCKIEK VSPFNDAVYQ VLLRPETAFD FQAGQYLCVV MGEKDKRPFS IASAPNAELI 
ELHIGAAVSE SYPMQVVERL KACAIDGSTI DIEAPGGEAH LRHESQRPRL LIAGGTGFSY
IKSIVEHQIA IGQQVKTTLY WGCRTQDAMY FEAIARQWHD AHPWLNFVPV IEEAPANWQG
KTANLLAQIK QDFVSLNGYD IYIAGRFDMV GAAREIFREI GVEEAHLYGD AFAFIK